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BaseInfo

ncRNA ID novel_zma_miR2773
Species Zea mays
Class miRNA
Genome position Chr8:47940856-47941054 [-]
Reference genome RefGen_v4
Source SRR2089713
Length 22
Mature sequence(if miRNA) 178 - UUUAAGGAUCGAUAGUCAAUGC - 199
Stem-loop(if miRNA) --UUUAA  -    --A     ----  U  A    U  U   -A       ----CCUU    GUGACAAACAGAACUGGUGCUCCCCAAGGAAAUGAGCUAGGA
       GG AUCG   UAGUC    AA GC CAUA CC CAU  CUUCCAU        UUUG                                          C
       || ||||   |||||    || || |||| || |||  |||||||        ||||                                          G
       CC UGGC   GUUAG    UU CG GUAU GG GUA  GAGGGUG        GUCU                                          A
AUAAGAG  G    GUG     CGUU  C  -    -  C   CC       ACUUAACC    UGAUUUUGAGGUCUAGCGUCUGGAAAUUGUCUUUCCCAUAUA
Stem-loop sequence UUUAAGGAUCGAUAGUCAAUGCACAUAUCCUCAUACUUCCAUCCUUUUUGGUGACAAACAGAACUGGUGCUCCCCAAGGAAAUGAGCUAGGACGAAUAUACCCUUUCUGUUAAAGGUCUGCGAUCUGGAGUUUUAGUUCUGCCAAUUCAGUGGGAGCCAUGCGGUAUGGCCUUUUGCGAUUGGUGCGGUGCCGAGAAUA