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BaseInfo

ncRNA ID novel_zma_miR2748
Species Zea mays
Class miRNA
Genome position Chr8:126987692-126987756 [+]
Reference genome RefGen_v4
Source SRR2089713
Length 24
Mature sequence(if miRNA) 1 - CUCUCUGCGGAGGCGUGGACGGUC - 24
Stem-loop(if miRNA) --     U  GG   -       G  CCG    A
  CUCUC GC  AGG CGUGGAC GU   CGGC C
  ||||| ||  ||| ||||||| ||   |||| A
  GAGAG UG  UCC GUGCCUG CA   GCCG G
AC     -  GG   A       A  --A    G
Stem-loop sequence CUCUCUGCGGAGGCGUGGACGGUCCGCGGCACAGGGCCGAACAGUCCGUGACCUGGGUGAGAGCA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
BT039435.1
ncRNA:24   CUGGCAGGUGCGGAGGCGUCUCUC   1
  ||||||||=|||||||||||||||
targets:305   GACCGUCCGCGCCUCCGCAGAGAG   328

1.0 Zea mays full-length cDNA clone ZM_BFc0013G13 mRNA, complete cds NA coding protein psRNATarget
NM_001349036.1
ncRNA:24   CUG-GCAGGUGCGGAGGCGUCUCUC   1
  |||-||*||||||||||||*|||||
targets:94   GACGCGCCCACGCCUCCGCUGAGAG   118

2.5 Zea mays Protein NRT1/ PTR FAMILY 5.10 (LOC100382172), mRNA NA coding protein psRNATarget