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BaseInfo

ncRNA ID novel_zma_miR2747
Species Zea mays
Class miRNA
Genome position Chr1:156947493-156947561 [+]
Reference genome RefGen_v4
Source SRR2089713
Length 24
Mature sequence(if miRNA) 1 - UGCUCUCUGCACAGGCACGGACGG - 24
Stem-loop(if miRNA) --U     C   A    - A     G  CUG     
   GCUCU UGC CAGG C CGGAC GU   CGGCCA
   ||||| ||| |||| | ||||| ||   |||||G
   CGGGA GCG GUCC G GUCUG UA   GCCGGG
GCU     C   -    A C     G  --A     
Stem-loop sequence UGCUCUCUGCACAGGCACGGACGGUCUGCGGCCAGGGGCCGAAUGGUCUGCGACCUGGCGCAGGGCUCG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
JB163540.1
ncRNA:24   GGCAGGCACGGACACGUCUCUCGU   1
  |||||||*|||||||||||||*||
targets:49   CCGUCCGCGCCUGUGCAGAGAUCA   72

2.5 Sequence 1204 from Patent EP2559767 NA coding protein psRNATarget
LQ235209.1
ncRNA:24   GGCAGGCACGGACACGUCUCUCGU   1
  |||||||*|||||||||||||*||
targets:49   CCGUCCGCGCCUGUGCAGAGAUCA   72

2.5 Sequence 1204 from Patent EP2985353 NA coding protein psRNATarget
HI403079.1
ncRNA:24   GGCAGGCACGGACACGUCUCUCGU   1
  |||||||*|||||||||||||*||
targets:49   CCGUCCGCGCCUGUGCAGAGAUCA   72

2.5 Sequence 1204 from Patent EP2074227 NA coding protein psRNATarget