ncRNA ID | novel_zma_miR2740 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr1:147319109-147319271 [+] |
Reference genome | RefGen_v4 |
Source | SRR2089713;SRR2089701;SRR2089708 |
Length | 24 |
Mature sequence(if miRNA) | 1 - AGACGGCCGUAGGAAGUUAGCAUG - 24 |
Stem-loop(if miRNA) |
---A  C                    CA              C  -CCUC  C            -U    G   -  -    C     GA GGCCGUAGGAAGUUAGCAUG  CAGCUAACUUCCUA GA     CU UAGGAAGUUAGC  UUCA UUG CU CAUC G     || ||||||||||||||||||||  |||||||||||||| ||     || ||||||||||||  |||| ||| || ||||     CU CCGGCAUCCUUCAAUCGUAC  GUCGAUUGAAGGAU CU     GG GUUCUUCAAUCG  GAGU AAC GG GUGG U UCUC  -                    AC              -  CCGCC  C            CC    A   U  C    G |
Stem-loop sequence | AGACGGCCGUAGGAAGUUAGCAUGCACAGCUAACUUCCUACGACCUCCUCUAGGAAGUUAGCUUUCAGUUGCUCAUCCGUGGGUGCGGUCAAAUGAGCCGCUAACUUCUUGCGGCCGCCUCUAGGAAGUUAGCUGCACAUGCUAACUUCCUACGGCCUCCUCU |