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BaseInfo

ncRNA ID novel_zma_miR2740
Species Zea mays
Class miRNA
Genome position Chr1:147319109-147319271 [+]
Reference genome RefGen_v4
Source SRR2089713;SRR2089701;SRR2089708
Length 24
Mature sequence(if miRNA) 1 - AGACGGCCGUAGGAAGUUAGCAUG - 24
Stem-loop(if miRNA) ---A  C                    CA              C  -CCUC  C            -U    G   -  -    C
    GA GGCCGUAGGAAGUUAGCAUG  CAGCUAACUUCCUA GA     CU UAGGAAGUUAGC  UUCA UUG CU CAUC G
    || ||||||||||||||||||||  |||||||||||||| ||     || ||||||||||||  |||| ||| || ||||
    CU CCGGCAUCCUUCAAUCGUAC  GUCGAUUGAAGGAU CU     GG GUUCUUCAAUCG  GAGU AAC GG GUGG U
UCUC  -                    AC              -  CCGCC  C            CC    A   U  C    G
Stem-loop sequence AGACGGCCGUAGGAAGUUAGCAUGCACAGCUAACUUCCUACGACCUCCUCUAGGAAGUUAGCUUUCAGUUGCUCAUCCGUGGGUGCGGUCAAAUGAGCCGCUAACUUCUUGCGGCCGCCUCUAGGAAGUUAGCUGCACAUGCUAACUUCCUACGGCCUCCUCU