ncRNA ID | novel_zma_miR2739 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr7:72023706-72023910 [+] |
Reference genome | RefGen_v4 |
Source | SRR2089713;SRR5451004 |
Length | 24 |
Mature sequence(if miRNA) | 182 - UUCUCUGUAGAUAUUAUGAGGCAU - 205 |
Stem-loop(if miRNA) |
--    -            -U  C    GAAA      UGGGAAA    AGAAA   AGAU  U      G      G   C   GG         GGU     GAG       GCUU GUAAUGUCUGCG  GA GGGU    CGCUCU       GGUA     AGC    AC GAACUU UCAAGU AUU AGG  CACCUACAG   UGUCU   GUCCG   |||| ||||||||||||  || ||||    ||||||       ||||     |||    || |||||| |||||| ||| |||  |||||||||   |||||   ||||U   CGGA UAUUAUAGAUGU  CU CCCG    GCGAGG       CUAU     UCG    UG CUUGGA GGUUCA UAA UCC  GUGGAUGUC   ACAGG   CAGGU UA    G            CU  U    --AA      -------    ---GG   ACAC  C      G      G   -   GG         --A     -AA     |
Stem-loop sequence | GCUUGUAAUGUCUGCGUGACGGGUGAAACGCUCUUGGGAAAGGUAAGAAAAGCAGAUACUGAACUUGUCAAGUGAUUCAGGGGCACCUACAGGGUUGUCUGAGGUCCGUUGGACAAGGACAACUGUAGGUGGGCCUAAUGACUUGGGAGGUUCCGUCACAGCUGGUAUCGGAGCGAAGCCCUUCUCUGUAGAUAUUAUGAGGCAU |