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BaseInfo

ncRNA ID novel_zma_miR2739
Species Zea mays
Class miRNA
Genome position Chr7:72023706-72023910 [+]
Reference genome RefGen_v4
Source SRR2089713;SRR5451004
Length 24
Mature sequence(if miRNA) 182 - UUCUCUGUAGAUAUUAUGAGGCAU - 205
Stem-loop(if miRNA) --    -            -U  C    GAAA      UGGGAAA    AGAAA   AGAU  U      G      G   C   GG         GGU     GAG    
  GCUU GUAAUGUCUGCG  GA GGGU    CGCUCU       GGUA     AGC    AC GAACUU UCAAGU AUU AGG  CACCUACAG   UGUCU   GUCCG
  |||| ||||||||||||  || ||||    ||||||       ||||     |||    || |||||| |||||| ||| |||  |||||||||   |||||   ||||U
  CGGA UAUUAUAGAUGU  CU CCCG    GCGAGG       CUAU     UCG    UG CUUGGA GGUUCA UAA UCC  GUGGAUGUC   ACAGG   CAGGU
UA    G            CU  U    --AA      -------    ---GG   ACAC  C      G      G   -   GG         --A     -AA    
Stem-loop sequence GCUUGUAAUGUCUGCGUGACGGGUGAAACGCUCUUGGGAAAGGUAAGAAAAGCAGAUACUGAACUUGUCAAGUGAUUCAGGGGCACCUACAGGGUUGUCUGAGGUCCGUUGGACAAGGACAACUGUAGGUGGGCCUAAUGACUUGGGAGGUUCCGUCACAGCUGGUAUCGGAGCGAAGCCCUUCUCUGUAGAUAUUAUGAGGCAU