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BaseInfo

ncRNA ID novel_zma_miR2733
Species Zea mays
Class miRNA
Genome position Chr7:20575077-20575162 [-]
Reference genome RefGen_v4
Source SRR2089713
Length 24
Mature sequence(if miRNA) 63 - AAUGGAGUGAAUUGAGGGGGCUAG - 86
Stem-loop(if miRNA) --       U A             G      C     C   A
  AAUGGAG G AUUGAGGGGGCUA AAUCCC UACUA UUA U
  ||||||| | ||||||||||||| |||||| ||||| |||
  UUACCUC C UAACUCCCUCGAU UUAGGG AUGAU AGU U
CA       C C             A      A     A   U
Stem-loop sequence AAUGGAGUGAAUUGAGGGGGCUAGAAUCCCCUACUACUUAAUUUUGAAUAGUAAGGGAUUAUAGCUCCCUCAAUCCCCUCCAUUAC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
EZ055935.1
ncRNA:24   GAUCGGGGGAGUUAAGUGAGGUAA   1
  =||-|*||||||||*|||||||||
targets:16   UUA-CACCCUCAAUCCACUCCAUU   38

2.5 TSA: Zea mays contig57057, mRNA sequence NA coding protein psRNATarget