Search result

BaseInfo

ncRNA ID novel_zma_miR2717
Species Zea mays
Class miRNA
Genome position Chr7:147830993-147831066 [-]
Reference genome RefGen_v4
Source SRR2089713;SRR2089714;SRR2089708
Length 24
Mature sequence(if miRNA) 1 - UGGUUGAAUAGUAGAAUAGAGCGG - 24
Stem-loop(if miRNA) --A          -    UG  ---AA      C   UC
   UUCUAUUCUG UGUU  GC     GAAGAA AUG  A
   |||||||||| ||||  ||     |||||| |||
   GAGAUAAGAU AUAA  UG     UUUUUU UAU  C
GGC          G    GU  GUUUG      U   UU
Stem-loop sequence AUUCUAUUCUGUGUUUGGCAAGAAGAACAUGUCACUUUAUUUUUUUUGUUUGGUUGAAUAGUAGAAUAGAGCGG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
EU945197.1
ncRNA:24   GGCGAGAUAAGAUGAUAAGUUGGU   1
  |||||||||||||||*||||||||
targets:107   CCGCUCUAUUCUACUCUUCAACCA   130

1.5 Zea mays clone 244184 mRNA sequence NA coding protein psRNATarget