ncRNA ID | novel_zma_miR2715 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr1:129540332-129540477 [+] |
Reference genome | RefGen_v4 |
Source | SRR2089713 |
Length | 24 |
Mature sequence(if miRNA) | 1 - AAUACAGCUUAUUUUCGUCGGCCC - 24 |
Stem-loop(if miRNA) |
--AA    -GC                -       CAC      AUAUUUCC            -   GCCG   AA     UACA   UUAUUUUCGUCGGCCC CGGGGCC   GAAAAU        UAUUUUCGUGGG CAG    ACG  A     ||||   |||||||||||||||| |||||||   ||||||        |||||||||||| |||    |||     AUGU   AAUAAAAGCAGCCGGG GCCCUGG   CUUUUA        AUAAAAGCACCC GUC    UGU  A UUUA    AUC                A       CUA      --AACCGA            A   ---A   AU |
Stem-loop sequence | AAUACAGCUUAUUUUCGUCGGCCCCGGGGCCCACGAAAAUAUAUUUCCUAUUUUCGUGGGCAGGCCGACGAAAAUAUGUACUGACCCACGAAAAUAAGCCAAAUUUUCAUCGGUCCCGAGGGCCGACGAAAAUAACUAUGUAAUUU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
BT042581.1 |
|
1.5 | Zea mays full-length cDNA clone ZM_BFb0345H15 mRNA, complete cds | NA | coding protein | psRNATarget |