ncRNA ID | novel_zma_miR2709 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr10:59319138-59319263 [+] |
Reference genome | RefGen_v4 |
Source | SRR1583944;SRR2647343 |
Length | 24 |
Mature sequence(if miRNA) | 1 - AAAUCUUAAGAUCUUUUUGGUGGA - 24 |
Stem-loop(if miRNA) |
--       A         U                                     -GU   C   AAAUCUU AGAUCUUUU GGUGGAUAGUUUACGUGGGUAUUGUUGUAAGCCGUCG   UGC C   ||||||| ||||||||| |||||||||||||||||||||||||||||||||||||   |||   UUUAGAA UCUAGAAAA UCACCUAUCAAAUGCACCCAUAACAACAUUUGGCAGC   GCG G UU       C         -                                     GUU   U |
Stem-loop sequence | AAAUCUUAAGAUCUUUUUGGUGGAUAGUUUACGUGGGUAUUGUUGUAAGCCGUCGGUUGCCCGUGCGUUGCGACGGUUUACAACAAUACCCACGUAAACUAUCCACUAAAAGAUCUCAAGAUUUUU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
EU943671.1 |
|
0.0 | Zea mays clone 1675716 mRNA sequence | NA | coding protein | psRNATarget | |||||||||
EU948769.1 |
|
2.5 | Zea mays clone 384376 mRNA sequence | NA | coding protein | psRNATarget |