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BaseInfo

ncRNA ID	novel_zma_miR2703
Species	Zea mays
Class	miRNA
Genome position	Chr6:27103772-27103823 [-]
Reference genome	RefGen_v4
Source	SRR2089713
Length	24
Mature sequence(if miRNA)	1 - CGGUGAAUUUUAGUGGAGCGUGCC - 24
Stem-loop(if miRNA)	-CGUU          --C       A      GCUCCGCUGG   UCACCGG C      ||||||||||   ||||||| A      CGAGGUGAUU   AGUGGCC G CCGUG          UUA       U
Stem-loop sequence	CGUUGCUCCGCUGGCUCACCGGACAGUCCGGUGAAUUUUAGUGGAGCGUGCC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_020541939.1	ncRNA:24   CCGUGCGAGGUGAUUUUAAGUGGC   1   ||||=|||||=|||*||||||||| targets:1022   GGCAUGCUCCGCUAUAAUUCACCG   1045 Target Full Sequence	2.5	PREDICTED: Zea mays uncharacterized LOC100272534 (LOC100272534), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_020541938.1	ncRNA:24   CCGUGCGAGGUGAUUUUAAGUGGC   1   ||||=|||||=|||*||||||||| targets:1035   GGCAUGCUCCGCUAUAAUUCACCG   1058 Target Full Sequence	2.5	PREDICTED: Zea mays uncharacterized LOC100272534 (LOC100272534), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_008650945.1	ncRNA:24   CCGUGCGAGGUGAUUUUAAGUGGC   1   |||=||||||=|||*||||||||| targets:833   GGCGCGCUCCGCUAUAAUUCACCG   856 Target Full Sequence	2.5	PREDICTED: Zea mays uncharacterized LOC103629851 (LOC103629851), mRNA	NA	coding protein	psRNATarget
EU952069.1	ncRNA:24   CCGUGCGAGGUGAUUUUAAGUGGC   1   |||=||||||=|||*||||||||| targets:841   GGCGCGCUCCGCUAUAAUUCACCG   864 Target Full Sequence	2.5	Zea mays clone 1155789 hypothetical protein mRNA, complete cds	NA	coding protein	psRNATarget
NM_001176828.1	ncRNA:24   CCGUGCGAGGUGAUUUUAAGUGGC   1   |||-=|||||=|||*||||||||| targets:689   GGC-UGCUCCGCUAUAAUUCACCG   711 Target Full Sequence	2.5	Zea mays uncharacterized LOC100384263 (LOC100384263), mRNA	NA	coding protein	psRNATarget
BT069634.1	ncRNA:24   CCGUGCGAGGUGAUUUUAAGUGGC   1   |||-=|||||=|||*||||||||| targets:689   GGC-UGCUCCGCUAUAAUUCACCG   711 Target Full Sequence	2.5	Zea mays full-length cDNA clone ZM_BFb0193J19 mRNA, complete cds	NA	coding protein	psRNATarget
EU970212.1	ncRNA:24   CCGUGCGAGGUGAUUUUAAGUGGC   1   ***=||||||=|||*||||||||| targets:468   AAGGCGCUCCGCUAUAAUUCACCG   491 Target Full Sequence	2.5	Zea mays clone 342257 hypothetical protein mRNA, complete cds	NA	coding protein	psRNATarget
HI409848.1	ncRNA:24   CCGUGCGAGGUGAUUUUAAGUGGC   1   **=*||||||=|||*||||||||| targets:76   AAUCCGCUCCGCUAUAAUUCACCG   99 Target Full Sequence	2.5	Sequence 7973 from Patent EP2074227	NA	coding protein	psRNATarget
LQ241978.1	ncRNA:24   CCGUGCGAGGUGAUUUUAAGUGGC   1   **=*||||||=|||*||||||||| targets:76   AAUCCGCUCCGCUAUAAUUCACCG   99 Target Full Sequence	2.5	Sequence 7973 from Patent EP2985353	NA	coding protein	psRNATarget
JB170309.1	ncRNA:24   CCGUGCGAGGUGAUUUUAAGUGGC   1   **=*||||||=|||*||||||||| targets:76   AAUCCGCUCCGCUAUAAUUCACCG   99 Target Full Sequence	2.5	Sequence 7973 from Patent EP2559767	NA	coding protein	psRNATarget