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BaseInfo

ncRNA ID novel_zma_miR2701
Species Zea mays
Class miRNA
Genome position Chr6:31668219-31668272 [+]
Reference genome RefGen_v4
Source SRR2089713
Length 24
Mature sequence(if miRNA) 1 - UCGGACAUAGGCUAUUUUCGACGG - 24
Stem-loop(if miRNA) --     C   -  C            
  UCGGA AUA GG UAUUUUCGACGGC
  ||||| ||| || ||||||||||||U
  AGCCU UAU CC AUAAAGGCUGCCG
CC     U   U  A            
Stem-loop sequence UCGGACAUAGGCUAUUUUCGACGGCUGCCGUCGGAAAUAACCUUAUUUCCGACC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
BT084287.2
ncRNA:24   GGCAGCUUUUAUCGGA-UACAGGCU   1
  *|||||||||||||||-||||||||
targets:691   GCGUCGAAAAUAGCCUUAUGUCCGA   715

3.0 Zea mays full-length cDNA clone ZM_BFb0098I11 mRNA, complete cds NA coding protein psRNATarget