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BaseInfo

ncRNA ID novel_zma_miR2692
Species Zea mays
Class miRNA
Genome position Chr5:164364764-164364830 [-]
Reference genome RefGen_v4
Source SRR1583944
Length 24
Mature sequence(if miRNA) 44 - AAGAGACACUCGGCAAAGAAACCG - 67
Stem-loop(if miRNA) --AA                  A  GCCA   AG
    GAGACACUCGGCAAAGAA CC    GGG  G
    |||||||||||||||||| ||    |||
    UUCUGUGAGCCGUUUCUU GG    CCC  G
UGAA                  -  ACUA   CU
Stem-loop sequence AAGAGACACUCGGCAAAGAAACCGCCAGGGAGGGUCCCCAUCAGGUUCUUUGCCGAGUGUCUUAAGU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
HI406639.1
ncRNA:24   GCCAAAGAAACGGCUCACAGAGAA   1
  =||**|||||||||||||||*|||
targets:16   UGGAGUCUUUGCCGAGUGUCCCUU   39

1.5 Sequence 4764 from Patent EP2074227 NA coding protein psRNATarget
LQ238769.1
ncRNA:24   GCCAAAGAAACGGCUCACAGAGAA   1
  =||**|||||||||||||||*|||
targets:16   UGGAGUCUUUGCCGAGUGUCCCUU   39

1.5 Sequence 4764 from Patent EP2985353 NA coding protein psRNATarget
JB167100.1
ncRNA:24   GCCAAAGAAACGGCUCACAGAGAA   1
  =||**|||||||||||||||*|||
targets:16   UGGAGUCUUUGCCGAGUGUCCCUU   39

1.5 Sequence 4764 from Patent EP2559767 NA coding protein psRNATarget