Search result

BaseInfo

ncRNA ID novel_zma_miR2686
Species Zea mays
Class miRNA
Genome position Chr6:138865694-138865819 [-]
Reference genome RefGen_v4
Source SRR2089713
Length 24
Mature sequence(if miRNA) 1 - AGACAACUAAGAGACUGGAUGAUA - 24
Stem-loop(if miRNA) --    G          A  A   CACA   AUAAAAAAUCGAUAAAAAAU   AGUUAGGGUAUUUGCAAC
  UCAU UAGUCUUUUA UU UCU    UAC                    GAG                  C
  |||| |||||||||| || |||    |||                    |||
  AGUA GUCAGAGAAU AA AGA    AUG                    CCU                  C
AU    G          C  C   AAAC   ------------------AG   UUUGCUAGGUUUCCGAGU
Stem-loop sequence UCAUGUAGUCUUUUAAUUAUCUCACAUACAUAAAAAAUCGAUAAAAAAUGAGAGUUAGGGUAUUUGCAACCCUGAGCCUUUGGAUCGUUUUCCGAGUACAAAAGACAACUAAGAGACUGGAUGAUA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
BT039070.1
ncRNA:24   AUAGUAGGUCAGAGAAUCAACAGA   1
  |||*||**||||||||||||||||
targets:1119   UAUAAUAGAGUCUCUUAGUUGUCU   1142

2.0 Zea mays full-length cDNA clone ZM_BFb0368E04 mRNA, complete cds NA coding protein psRNATarget
BT038793.1
ncRNA:24   AUAGUAGGUCAGAGAAUCAACAGA   1
  |*|==||||||||||*|||||||*
targets:928   UUUUGUCCAGUCUCUGAGUUGUCC   951

2.5 Zea mays full-length cDNA clone ZM_BFb0326E19 mRNA, complete cds NA coding protein psRNATarget