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BaseInfo

ncRNA ID	osa-miR2920
Species	Oryza sativa
Class	miRNA
Genome position	Chr7:28405506-28405715 [-]
Reference genome	MSU7
Source	miRBase
Length	23
Mature sequence(if miRNA)	86 - AAACAACAAUAUAACAUUUCAAA - 108
Stem-loop(if miRNA)	CAA A  GU  CUAAAAUAUUAUAGACAAAACAAGUCACUACAUAAUACAUAUAAGCAGAUACAGAAACAAGUUUAUUGUCCUAUACCAAAUUUCAAAAUUCAAAC    G GG  UC                                                                                               A    | ||  ||                                                                                               A    A CC  GG                                                                                               C --G -  --  UAACCGGUUUACCACUAUCAUAUACGCCAUAGGUGCCACAAAUAACUUAUCAACUUAUGGGUUACAUUUGAUCGAUUAUAAACUUUACAAUAUAA
Stem-loop sequence	CAAGAGGGUUCCUAAAAUAUUAUAGACAAAACAAGUCACUACAUAAUACAUAUAAGCAGAUACAGAAACAAGUUUAUUGUCCUAUACCAAAUUUCAAAAUUCAAACAACAAUAUAACAUUUCAAAUAUUAGCUAGUUUACAUUGGGUAUUCAACUAUUCAAUAAACACCGUGGAUACCGCAUAUACUAUCACCAUUUGGCCAAUGGCCAG

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_015774300.1	ncRNA:23   AA-ACUUUA-CAAUAUAACAACAAA   1   ||-|*||||-||||||||||||||* targets:1255   UUAUUAAAUAGUUAUAUUGUUGUUA   1279 Target Full Sequence	3.0	PREDICTED: Oryza sativa Japonica Group peroxidase A2 (LOC9269736), mRNA	peroxidase A2(LOC9269736)	coding protein	psRNATarget

Reference

1	PMID:20131478 "Cloning and validation of novel miRNA from basmati rice indicates cross talk between abiotic and biotic stresses"; Sanan-Mishra N, Kumar V, Sopory SK, Mukherjee SK; Mol Genet Genomics. 282:463-474(2009).