Search result

BaseInfo

ncRNA ID	novel_zma_miR2662
Species	Zea mays
Class	miRNA
Genome position	Chr5:60537878-60537936 [-]
Reference genome	RefGen_v4
Source	SRR2089713;SRR2089715;SRR4237227;SRR5100255;SRR5105961;SRR2089700;SRR2089701;SRR2089704
Length	24
Mature sequence(if miRNA)	1 - AAAGGAACUAGAACGGAAUGACUC - 24
Stem-loop(if miRNA)	--          C C     UG    UGU   GUCGUUCUGU C AGUUU  UUGU   U   |||||||||| | |||||  ||||   U   CAGUAAGGCA G UCAAG  AACA   G CU          A A     GA    UUG
Stem-loop sequence	GUCGUUCUGUCCCAGUUUUGUUGUUGUUUGGUUACAAAGGAACUAGAACGGAAUGACUC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_020546669.1	ncRNA:24   CUCAGUAAGGCAAGAUCAAGGAAA   1   ||||||||=||||||||||||||| targets:28   GAGUCAUUUCGUUCUAGUUCCUUU   51 Target Full Sequence	1.0	PREDICTED: Zea mays hypothetical protein (LOC103643194), transcript variant X1, mRNA	NA	coding protein	psRNATarget
JB170147.1	ncRNA:24   CUCAGUAAGGCAAGAUCAAGGAAA   1   |||*||*||||||||||||*|||| targets:108   GAGCCACUCCGUUCUAGUUACUUU   131 Target Full Sequence	2.5	Sequence 7811 from Patent EP2559767	NA	coding protein	psRNATarget
HI409686.1	ncRNA:24   CUCAGUAAGGCAAGAUCAAGGAAA   1   |||*||*||||||||||||*|||| targets:108   GAGCCACUCCGUUCUAGUUACUUU   131 Target Full Sequence	2.5	Sequence 7811 from Patent EP2074227	NA	coding protein	psRNATarget
LQ241816.1	ncRNA:24   CUCAGUAAGGCAAGAUCAAGGAAA   1   |||*||*||||||||||||*|||| targets:108   GAGCCACUCCGUUCUAGUUACUUU   131 Target Full Sequence	2.5	Sequence 7811 from Patent EP2985353	NA	coding protein	psRNATarget