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BaseInfo

ncRNA ID	novel_zma_miR2655
Species	Zea mays
Class	miRNA
Genome position	Chr5:181092099-181092204 [-]
Reference genome	RefGen_v4
Source	SRR2089713;SRR2089715
Length	21
Mature sequence(if miRNA)	86 - UGACAAGGGAAUUGGAGGGGA - 106
Stem-loop(if miRNA)	--   CA                -              C U     -C     A   UGA  AGGGAAUUGGAGGGGA CCAUGGAGGAGGAA C CCUUU  UAUUC A   |||  |||||||||||||||| |||||||||||||| | |||||  ||||| U   ACU  UUCCUUAACUUCUCCU GGUACCUCCUCUUU G GGAAA  AUAAG U CC   UG                A              A -     CU     U
Stem-loop sequence	UGACAAGGGAAUUGGAGGGGACCAUGGAGGAGGAACCUCCUUUCUAUUCAAUUUGAAUAUCAAAGGGAUUUCUCCUCCAUGGAUCCUCUUCAAUUCCUUGUUCACC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
BT069264.1	ncRNA:21   AGGGGAGGUUAAGGGAACAGU   1   ||||||||||||=|||||||| targets:611   UCCCCUCCAAUUUCCUUGUCA   631 Target Full Sequence	1.5	Zea mays full-length cDNA clone ZM_BFc0018B12 mRNA, complete cds	NA	coding protein	psRNATarget
XM_020551510.1	ncRNA:21   AGGGGAGGUUAAGGGAACAGU   1   |||||*=|||||||||||||| targets:1578   UCCCCCUCAAUUCCCUUGUCA   1598 Target Full Sequence	2.0	PREDICTED: Zea mays putative ACT-domain containing protein kinase family protein (LOC100280199), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_020547639.1	ncRNA:21   AGGGGAGGUUAAGGGAACAGU   1   |||||**|||||||||||||| targets:1556   UCCCCCACAAUUCCCUUGUCA   1576 Target Full Sequence	2.0	PREDICTED: Zea mays uncharacterized LOC100278581 (LOC100278581), transcript variant X4, mRNA	NA	coding protein	psRNATarget
XM_020547637.1	ncRNA:21   AGGGGAGGUUAAGGGAACAGU   1   |||||**|||||||||||||| targets:1556   UCCCCCACAAUUCCCUUGUCA   1576 Target Full Sequence	2.0	PREDICTED: Zea mays uncharacterized LOC100278581 (LOC100278581), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_020547640.1	ncRNA:21   AGGGGAGGUUAAGGGAACAGU   1   |||||**|||||||||||||| targets:1556   UCCCCCACAAUUCCCUUGUCA   1576 Target Full Sequence	2.0	PREDICTED: Zea mays uncharacterized LOC100278581 (LOC100278581), transcript variant X5, mRNA	NA	coding protein	psRNATarget
XM_020547638.1	ncRNA:21   AGGGGAGGUUAAGGGAACAGU   1   |||||**|||||||||||||| targets:1556   UCCCCCACAAUUCCCUUGUCA   1576 Target Full Sequence	2.0	PREDICTED: Zea mays uncharacterized LOC100278581 (LOC100278581), transcript variant X3, mRNA	NA	coding protein	psRNATarget
XM_020547636.1	ncRNA:21   AGGGGAGGUUAAGGGAACAGU   1   |||||**|||||||||||||| targets:1556   UCCCCCACAAUUCCCUUGUCA   1576 Target Full Sequence	2.0	PREDICTED: Zea mays uncharacterized LOC100278581 (LOC100278581), transcript variant X1, mRNA	NA	coding protein	psRNATarget