ncRNA ID | novel_zma_miR2648 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr5:222468560-222468654 [+] |
Reference genome | RefGen_v4 |
Source | SRR2089713;SRR2089714;SRR2287160;SRR2287162;SRR2287165;SRR2089701 |
Length | 24 |
Mature sequence(if miRNA) | 72 - AAUAGAAUAAGAUAGAAGGACUAA - 95 |
Stem-loop(if miRNA) |
--     C  C         C        C        U       A   AGUCC UC AUUUUAUUC AUUUUAGU UCUAAAUU CCAAAUA G   ||||| || ||||||||| |||||||| |||||||| ||||||| G   UCAGG AG UAGAAUAAG UAAAAUCA AGAUUUAA GGUUUAU A AA     A  A         A        U        C       A |
Stem-loop sequence | AGUCCCUCCAUUUUAUUCCAUUUUAGUCUCUAAAUUUCCAAAUAAGGAAUAUUUGGCAAUUUAGAUACUAAAAUAGAAUAAGAUAGAAGGACUAA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_020538756.1 |
|
2.5 | PREDICTED: Zea mays uncharacterized LOC109940018 (LOC109940018), mRNA | NA | coding protein | psRNATarget | |||||||||
AY108890.1 |
|
2.5 | Zea mays PCO139133 mRNA sequence | NA | coding protein | psRNATarget |