ncRNA ID | novel_zma_miR2644 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr5:210562804-210562927 [-] |
Reference genome | RefGen_v4 |
Source | SRR1583944 |
Length | 24 |
Mature sequence(if miRNA) | 1 - GGCAUCUAGGAUGAAUUUCAAACU - 24 |
Stem-loop(if miRNA) |
--               U     UG   UUAAA        --   -    CU   -A    A  G   UUUGAAAUUCAUCUU GAUGU  AGA     AAAAUAGA  AGU GUCA  AUC  ACAC UG U   ||||||||||||||| |||||  |||     ||||||||  ||| ||||  |||  |||| || G   AAACUUUAAGUAGGA CUACG  UCU     UUUUAUCU  UCG CAGU  UGG  UGUG AC A UC               U     GU   --UUA        GU   U    --   AC    -  A |
Stem-loop sequence | UUUGAAAUUCAUCUUUGAUGUUGAGAUUAAAAAAAUAGAAGUGUCACUAUCAACACAUGGUGAACAGUGUCAGGUUGACUGCUUGUCUAUUUUAUUUCUUGGCAUCUAGGAUGAAUUUCAAACU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
AY110425.1 |
|
1.5 | Zea mays CL28396_2 mRNA sequence | NA | coding protein | psRNATarget |