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BaseInfo

ncRNA ID novel_zma_miR2642
Species Zea mays
Class miRNA
Genome position Chr5:169062271-169062402 [+]
Reference genome RefGen_v4
Source SRR2089713;SRR2089701
Length 24
Mature sequence(if miRNA) 1 - AGGCCGUAGGAAGUUAGCAUGGGC - 24
Stem-loop(if miRNA) --A             U                      GA   GA  -G  U         CAGCA
   GGCCGUAGGAAGU AGCAUGGGCAGUUAACUUCCUA  GUC  CC  UA GAAGUUAGU     A
   ||||||||||||| ||||||||||||||||||||||  |||  ||  || |||||||||
   CCGGCAUUUUUUA UCGUACCUGUCGAUUGAAGGAU  CGG  GG  AU CUUCAAUCG     C
CCG             U                      GC   -A  AG  C         AAAAU
Stem-loop sequence AGGCCGUAGGAAGUUAGCAUGGGCAGUUAACUUCCUAGAGUCGACCGUAUGAAGUUAGUCAGCAACUAAAAGCUAACUUCCUAGAGGAGGCCGUAGGAAGUUAGCUGUCCAUGCUUAUUUUUUACGGCCGCC