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BaseInfo

ncRNA ID	novel_zma_miR2640
Species	Zea mays
Class	miRNA
Genome position	Chr5:216545247-216545304 [-]
Reference genome	RefGen_v4
Source	SRR1583944
Length	23
Mature sequence(if miRNA)	1 - CUGCCAGUGUAAAUAUCAUUAGC - 23
Stem-loop(if miRNA)	--    A     A        -    UUC   UAAU AUAUU GCACUGGC GGUU   U   |||| ||||| |||||||| ||||   U   AUUA UAUAA UGUGACCG CCGA   A CG    C     A        U    UGA
Stem-loop sequence	UAAUAAUAUUAGCACUGGCGGUUUUCUUAAGUAGCCUGCCAGUGUAAAUAUCAUUAGC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
BT054613.1	ncRNA:23   CGAUUACUAUAAAUGUGACCGUC   1   **|=|||*|||||||||||*||| targets:355   CGUGAUGUUAUUUACACUGACAG   377 Target Full Sequence	2.5	Zea mays full-length cDNA clone ZM_BFc0191I05 mRNA, complete cds	NA	coding protein	psRNATarget
AY106335.1	ncRNA:23   CGAUUACUAUAAAUGUGACCGUC   1   **|=|||*|||||||||||*||| targets:411   CGUGAUGUUAUUUACACUGACAG   433 Target Full Sequence	2.5	Zea mays PCO141803 mRNA sequence	NA	coding protein	psRNATarget
EU966721.1	ncRNA:23   CGAUUACUAUAAAUGUGACCGUC   1   **|=|||*|||||||||||*||| targets:443   CGUGAUGUUAUUUACACUGACAG   465 Target Full Sequence	2.5	Zea mays clone 296699 snRK1-interacting protein 1 mRNA, complete cds	NA	coding protein	psRNATarget
NM_001154138.1	ncRNA:23   CGAUUACUAUAAAUGUGACCGUC   1   **|=|||*|||||||||||*||| targets:431   CGUGAUGUUAUUUACACUGACAG   453 Target Full Sequence	2.5	Zea mays uncharacterized LOC100281219 (pco141803), mRNA	NA	coding protein	psRNATarget
EU955951.1	ncRNA:23   CGAUUACUAUAAAUGUGACCGUC   1   **|=|||*|||||||||||*||| targets:431   CGUGAUGUUAUUUACACUGACAG   453 Target Full Sequence	2.5	Zea mays clone 1554080 snRK1-interacting protein 1 mRNA, complete cds	NA	coding protein	psRNATarget