| ncRNA ID | osa-miR1424 |
| Species | Oryza sativa |
| Class | miRNA |
| Genome position | Chr7:26662355-26662654 [-] |
| Reference genome | MSU7 |
| Source | miRBase |
| Length | 21 |
| Mature sequence(if miRNA) | 12 - AUGCACACUGAUGCUGAUUGU - 32 |
| Stem-loop(if miRNA) |
CC GUUUAGCUCCCAGGCCAGUCAAGGUAGAGGCAGCUCAAAGUGUAGUCAUCUCUUGAUCGUUGAUUGCUCCAGUCCUAUCCCAUGCUCCUCCUUGAGCUCCCAAUCAUUGAGCUCUCGGAUCCUCUCUGCUCUUCUCUGAUCU AGCUA G ||||| CCUCA G AA AACAUGUUAGUCGUAGUCACACGUACGUAGGGACUAACGAAAUAGUAGAGACCUUUGGACUUUACUAGUUGAUGAAUGGAUGGAAUAUUAGAACAACAAGUCACAAGAAGUAAGACGUUGUACAAACCUUUGACCUUGCUGU |
| Stem-loop sequence | CCAGCUAGUUUAGCUCCCAGGCCAGUCAAGGUAGAGGCAGCUCAAAGUGUAGUCAUCUCUUGAUCGUUGAUUGCUCCAGUCCUAUCCCAUGCUCCUCCUUGAGCUCCCAAUCAUUGAGCUCUCGGAUCCUCUCUGCUCUUCUCUGAUCUGGUGUCGUUCCAGUUUCCAAACAUGUUGCAGAAUGAAGAACACUGAACAACAAGAUUAUAAGGUAGGUAAGUAGUUGAUCAUUUCAGGUUUCCAGAGAUGAUAAAGCAAUCAGGGAUGCAUGCACACUGAUGCUGAUUGUACAAACUCCAA |
| Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AK241337.1 |
|
2.5 | Oryza sativa Japonica Group cDNA, clone: J065144L23, full insert sequence | NA | coding protein | psRNATarget | |||||||||
| AK287919.1 |
|
2.5 | Oryza sativa Japonica Group cDNA, clone: J065216B14, full insert sequence | NA | coding protein | psRNATarget |
| 1 | PMID:18353984
"Genome-wide analysis for discovery of rice microRNAs reveals natural antisense microRNAs (nat-miRNAs)"; Lu C, Jeong DH, Kulkarni K, Pillay M, Nobuta K, German R, Thatcher SR, Maher C, Zhang L, Ware D, Liu B, Cao X, Meyers BC, Green PJ; Proc Natl Acad Sci U S A. 105:4951-4956(2008). |