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BaseInfo

ncRNA ID novel_zma_miR2636
Species Zea mays
Class miRNA
Genome position Chr10:68345231-68345374 [+]
Reference genome RefGen_v4
Source SRR2089713;SRR2089715;SRR2089700
Length 24
Mature sequence(if miRNA) 121 - ACUUUCUAGAGGUGGCCGUAGGAA - 144
Stem-loop(if miRNA) --    GA    G  G           A    C   --    UG     -   C  AAAC           GA  
  CCUA  GCUG CU UAGGAAGUUAG UUUU GCU  UGAC  GUCAA CGA UG    CUAACUUCCUA  GGA
  ||||  |||| || ||||||||||| |||| |||  ||||  ||||| ||| ||    |||||||||||  ||G
  GGAU  CGGU GA AUCUUUCAAUC AAAG CGA  ACUG  CGGUU GCU AU    GAUUGAAGGAU  CCG
AA    GC    G  G           C    U   CA    GU     U   U  ---C           -G  
Stem-loop sequence CCUAGAGCUGGCUGUAGGAAGUUAGAUUUUCGCUUGACUGGUCAACGACUGAAACCUAACUUCCUAGAGGAGGCCGUAGGAAGUUAGCUAUUCGUUUGGCUGGUCAACAGCUGAAACCUAACUUUCUAGAGGUGGCCGUAGGAA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
BT086229.2
ncRNA:24   AAGGAUGCCGGUGGAGAUCUUUCA   1
  ||=||||||||*||||||||||||
targets:1136   UUUCUACGGCCUCCUCUAGAAAGU   1159

1.5 Zea mays full-length cDNA clone ZM_BFc0134M03 mRNA, complete cds NA coding protein psRNATarget