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BaseInfo

ncRNA ID	novel_zma_miR2635
Species	Zea mays
Class	miRNA
Genome position	Chr5:132985573-132985773 [+]
Reference genome	RefGen_v4
Source	SRR2089713
Length	21
Mature sequence(if miRNA)	1 - UGAUAUCAUAUGUAGAGGCUU - 21
Stem-loop(if miRNA)	--                    U         AUUAAAAAA    C      AC     U                C        --UC     U    - U   UGAUAUCAUAUGUAGAGGCU UGAUAAAAA         GUUU GAGAAA  UGUGA GCACUAUGUGUAGAAA CUAAGAGA    CACAU GAAA C C   |||||||||||||||||||| |||||||||         |||| ||||||  ||||| |||||||||||||||| ||||||||    ||||| |||| | U   ACUAUAGUAUACAUCUCCGA ACUAUUUUU         CAAA CUCUUU  ACACU UGUGAUACACAUCUUU GAUUCUCU    GUGUA CUUU G A GU                    C         AAACUCUUA    U      CA     C                A        UGAU     -    A U
Stem-loop sequence	UGAUAUCAUAUGUAGAGGCUUUGAUAAAAAAUUAAAAAAGUUUCGAGAAAACUGUGAUGCACUAUGUGUAGAAACCUAAGAGAUCCACAUUGAAACUCUAUGAUUUCAUGUGUAGUUCUCUUAGAUUUCUACACAUAGUGUCUCACAACUUUCUCUAAACAUUCUCAAAUUUUUAUCACAGCCUCUACAUAUGAUAUCAUG

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
HI403209.1	ncRNA:21   UUCGGAGAUGUAUACUAUAGU   1   *|||||||||||||||||||| targets:206   CAGCCUCUACAUAUGAUAUCA   226 Target Full Sequence	0.0	Sequence 1334 from Patent EP2074227	NA	coding protein	psRNATarget
LQ235339.1	ncRNA:21   UUCGGAGAUGUAUACUAUAGU   1   *|||||||||||||||||||| targets:206   CAGCCUCUACAUAUGAUAUCA   226 Target Full Sequence	0.0	Sequence 1334 from Patent EP2985353	NA	coding protein	psRNATarget
JB163670.1	ncRNA:21   UUCGGAGAUGUAUACUAUAGU   1   *|||||||||||||||||||| targets:206   CAGCCUCUACAUAUGAUAUCA   226 Target Full Sequence	0.0	Sequence 1334 from Patent EP2559767	NA	coding protein	psRNATarget
EZ089840.1	ncRNA:21   UUCGGAGAUGUAUACUAUAGU   1   *|||||||||||||||||||| targets:2   CAGCCUCUACAUAUGAUAUCA   22 Target Full Sequence	0.0	TSA: Zea mays contig25486, mRNA sequence	NA	coding protein	psRNATarget
XM_020546111.1	ncRNA:21   UUCGGAGAUGUAUACUAUAGU   1   *||=|*||||||||||||||| targets:4025   UAGUCGCUACAUAUGAUAUCA   4045 Target Full Sequence	2.0	PREDICTED: Zea mays receptor-like protein 12 (LOC103642583), mRNA	NA	coding protein	psRNATarget