Search result

BaseInfo

ncRNA ID	novel_zma_miR2634
Species	Zea mays
Class	miRNA
Genome position	Chr5:11749276-11749366 [+]
Reference genome	RefGen_v4
Source	SRR2089713;SRR2089714;SRR2287163;SRR2089701
Length	24
Mature sequence(if miRNA)	1 - AUUCAUGUGGAUUGAGUGGGAUUG - 24
Stem-loop(if miRNA)	--        GG    AG          U      AAAUCUCAAG    UUA   AUUCAUGU  AUUG  UGGGAUUGGG GAAAUU          UAAG   A   ||||||||  ||||  |||||||||| ||||||          ||||   UAGGUACA  UAAC  ACUCUAAUCU UUUUAA          AUUC   A AA        --    CU          -      ----------    CUC
Stem-loop sequence	AUUCAUGUGGAUUGAGUGGGAUUGGGUGAAAUUAAAUCUCAAGUAAGUUAAACUCCUUAAAUUUUUCUAAUCUCAUCCAAUACAUGGAUAA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
EZ064016.1	ncRNA:24   GUUAGGGUGAGUUAGGUGUACUUA   1   |||||||||||||||||||||||| targets:124   CAAUCCCACUCAAUCCACAUGAAU   147 Target Full Sequence	0.0	TSA: Zea mays contig65139, mRNA sequence	NA	coding protein	psRNATarget
XM_020545430.1	ncRNA:24   GUUAGGGUGAGUUAGGUGUACUUA   1   |||||||||||||||||||||=|| targets:5808   CAAUCCCACUCAAUCCACAUGGAU   5831 Target Full Sequence	1.5	PREDICTED: Zea mays uncharacterized LOC109942872 (LOC109942872), mRNA	NA	coding protein	psRNATarget
XM_008658241.2	ncRNA:24   GUUAGGGUGAGUUAGGUGUACUUA   1   |||||||||||||||||||||=|| targets:1233   CAAUCCCACUCAAUCCACAUGGAU   1256 Target Full Sequence	1.5	PREDICTED: Zea mays probable peptidyl-tRNA hydrolase 2 (LOC103635865), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_020549842.1	ncRNA:24   GUUAGGGUGAGUUAGGUGUACUUA   1   |||||||||||||||||||||=|| targets:1203   CAAUCCCACUCAAUCCACAUGGAU   1226 Target Full Sequence	1.5	PREDICTED: Zea mays uncharacterized LOC100381972 (LOC100381972), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_020549841.1	ncRNA:24   GUUAGGGUGAGUUAGGUGUACUUA   1   |||||||||||||||||||||=|| targets:1203   CAAUCCCACUCAAUCCACAUGGAU   1226 Target Full Sequence	1.5	PREDICTED: Zea mays uncharacterized LOC100381972 (LOC100381972), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_020549843.1	ncRNA:24   GUUAGGGUGAGUUAGGUGUACUUA   1   |||||||||||||||||||||=|| targets:1085   CAAUCCCACUCAAUCCACAUGGAU   1108 Target Full Sequence	1.5	PREDICTED: Zea mays uncharacterized LOC100381972 (LOC100381972), transcript variant X3, mRNA	NA	coding protein	psRNATarget
BT066874.1	ncRNA:24   GUUAGGGUGAGUUAGGUGUACUUA   1   |||||||||||||||||||||=|| targets:1962   CAAUCCCACUCAAUCCACAUGGAU   1985 Target Full Sequence	1.5	Zea mays full-length cDNA clone ZM_BFb0081D21 mRNA, complete cds	NA	coding protein	psRNATarget
NM_001175969.1	ncRNA:24   GUUAGGGUGAGUUAGGUGUACUUA   1   |||||||||||||||||||||=|| targets:1962   CAAUCCCACUCAAUCCACAUGGAU   1985 Target Full Sequence	1.5	Zea mays uncharacterized LOC100383311 (LOC100383311), mRNA	NA	coding protein	psRNATarget
XM_008679547.2	ncRNA:24   GUUAGGGUGAGUUAGGUGUACUUA   1   |||||||||||||||||||||=|| targets:2504   CAAUCCCACUCAAUCCACAUGGAU   2527 Target Full Sequence	1.5	PREDICTED: Zea mays putative methyltransferase PMT15 (LOC101027245), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_008661718.2	ncRNA:24   GUUAGGGUGAGUUAGGUGUACUUA   1   |||||||||||||||||||||=|| targets:2215   CAAUCCCACUCAAUCCACAUGGAU   2238 Target Full Sequence	1.5	PREDICTED: Zea mays serine/arginine repetitive matrix protein 1 (LOC103638926), mRNA	NA	coding protein	psRNATarget
NM_001154031.1	ncRNA:24   GUUAGGGUGAGUUAGGUGUACUUA   1   |||||||||||||||||||||=|| targets:1819   CAAUCCCACUCAAUCCACAUGGAU   1842 Target Full Sequence	1.5	Zea mays uncharacterized LOC100281112 (LOC100281112), mRNA	NA	coding protein	psRNATarget
EU955633.1	ncRNA:24   GUUAGGGUGAGUUAGGUGUACUUA   1   |||||||||||||||||||||=|| targets:1819   CAAUCCCACUCAAUCCACAUGGAU   1842 Target Full Sequence	1.5	Zea mays clone 1540038 transposon protein mRNA, complete cds	NA	coding protein	psRNATarget
NM_001279968.1	ncRNA:24   GUUAGGGUGAGUUAGGUGUACUUA   1   |||||||||||||||||||||=|| targets:1534   CAAUCCCACUCAAUCCACAUGGAU   1557 Target Full Sequence	1.5	Zea mays putative methyltransferase PMT15 (LOC101027245), mRNA	NA	coding protein	psRNATarget
BT088232.1	ncRNA:24   GUUAGGGUGAGUUAGGUGUACUUA   1   |||||||||||||||||||||=|| targets:1534   CAAUCCCACUCAAUCCACAUGGAU   1557 Target Full Sequence	1.5	Zea mays full-length cDNA clone ZM_BFc0086F14 mRNA, complete cds	NA	coding protein	psRNATarget
BT066987.1	ncRNA:24   GUUAGGGUGAGUUAGGUGUACUUA   1   |||||||||||||||||||||=|| targets:1419   CAAUCCCACUCAAUCCACAUGGAU   1442 Target Full Sequence	1.5	Zea mays full-length cDNA clone ZM_BFb0138F03 mRNA, complete cds	NA	coding protein	psRNATarget
BT069115.2	ncRNA:24   GUUAGGGUGAGUUAGGUGUACUUA   1   |||||||||||||||||||||=|| targets:532   CAAUCCCACUCAAUCCACAUGGAU   555 Target Full Sequence	1.5	Zea mays full-length cDNA clone ZM_BFb0186N21 mRNA, complete cds	NA	coding protein	psRNATarget
BT041052.1	ncRNA:24   GUUAGGGUGAGUUAGGUGUACUUA   1   |||||||||||||||||||||=|| targets:1128   CAAUCCCACUCAAUCCACAUGGAU   1151 Target Full Sequence	1.5	Zea mays full-length cDNA clone ZM_BFc0169K03 mRNA, complete cds	NA	coding protein	psRNATarget
NM_001147844.1	ncRNA:24   GUUAGGGUGAGUUAGGUGUACUUA   1   |||||||||||||||||||||=|| targets:1128   CAAUCCCACUCAAUCCACAUGGAU   1151 Target Full Sequence	1.5	Zea mays Phytanoyl-CoA dioxygenase (LOC100273407), mRNA	NA	coding protein	psRNATarget
BT085319.2	ncRNA:24   GUUAGGGUGAGUUAGGUGUACUUA   1   |||||||||||||||||||||=|| targets:180   CAAUCCCACUCAAUCCACAUGGAU   203 Target Full Sequence	1.5	Zea mays full-length cDNA clone ZM_BFb0375P22 mRNA, complete cds	NA	coding protein	psRNATarget
XM_020552889.1	ncRNA:24   GUUAGGGUGAGUUAGGUGUACUUA   1   |||||||||||||||||||||=|| targets:878   CAAUCCCACUCAAUCCACAUGGAU   901 Target Full Sequence	1.5	PREDICTED: Zea mays pre-mRNA-splicing factor CWC21-like (LOC103654764), transcript variant X5, mRNA	NA	coding protein	psRNATarget
EU951448.1	ncRNA:24   GUUAGGGUGAGUUAGGUGUACUUA   1   |||||||||||||||||||||=|| targets:749   CAAUCCCACUCAAUCCACAUGGAU   772 Target Full Sequence	1.5	Zea mays clone 701961 mRNA sequence	NA	coding protein	psRNATarget
EU942673.1	ncRNA:24   GUUAGGGUGAGUUAGGUGUACUUA   1   |||||||||||||||||||||=|| targets:95   CAAUCCCACUCAAUCCACAUGGAU   118 Target Full Sequence	1.5	Zea mays clone 1529344 mRNA sequence	NA	coding protein	psRNATarget
LQ235220.1	ncRNA:24   GUUAGGGUGAGUUAGGUGUACUUA   1   |||||||||||||||||||||=|| targets:102   CAAUCCCACUCAAUCCACAUGGAU   125 Target Full Sequence	1.5	Sequence 1215 from Patent EP2985353	NA	coding protein	psRNATarget
HI403094.1	ncRNA:24   GUUAGGGUGAGUUAGGUGUACUUA   1   |||||||||||||||||||||=|| targets:102   CAAUCCCACUCAAUCCACAUGGAU   125 Target Full Sequence	1.5	Sequence 1219 from Patent EP2074227	NA	coding protein	psRNATarget
HI403090.1	ncRNA:24   GUUAGGGUGAGUUAGGUGUACUUA   1   |||||||||||||||||||||=|| targets:102   CAAUCCCACUCAAUCCACAUGGAU   125 Target Full Sequence	1.5	Sequence 1215 from Patent EP2074227	NA	coding protein	psRNATarget
JB163555.1	ncRNA:24   GUUAGGGUGAGUUAGGUGUACUUA   1   |||||||||||||||||||||=|| targets:102   CAAUCCCACUCAAUCCACAUGGAU   125 Target Full Sequence	1.5	Sequence 1219 from Patent EP2559767	NA	coding protein	psRNATarget
JB163551.1	ncRNA:24   GUUAGGGUGAGUUAGGUGUACUUA   1   |||||||||||||||||||||=|| targets:102   CAAUCCCACUCAAUCCACAUGGAU   125 Target Full Sequence	1.5	Sequence 1215 from Patent EP2559767	NA	coding protein	psRNATarget
LQ235224.1	ncRNA:24   GUUAGGGUGAGUUAGGUGUACUUA   1   |||||||||||||||||||||=|| targets:102   CAAUCCCACUCAAUCCACAUGGAU   125 Target Full Sequence	1.5	Sequence 1219 from Patent EP2985353	NA	coding protein	psRNATarget
HI403020.1	ncRNA:24   GUUAGGGUGAGUUAGGUGUACUUA   1   |||||||||||||||||||||=|| targets:102   CAAUCCCACUCAAUCCACAUGGAU   125 Target Full Sequence	1.5	Sequence 1145 from Patent EP2074227	NA	coding protein	psRNATarget
JB163481.1	ncRNA:24   GUUAGGGUGAGUUAGGUGUACUUA   1   |||||||||||||||||||||=|| targets:102   CAAUCCCACUCAAUCCACAUGGAU   125 Target Full Sequence	1.5	Sequence 1145 from Patent EP2559767	NA	coding protein	psRNATarget
LQ235150.1	ncRNA:24   GUUAGGGUGAGUUAGGUGUACUUA   1   |||||||||||||||||||||=|| targets:102   CAAUCCCACUCAAUCCACAUGGAU   125 Target Full Sequence	1.5	Sequence 1145 from Patent EP2985353	NA	coding protein	psRNATarget
LQ237971.1	ncRNA:24   GUUAGGGUGAGUUAGGUGUACUUA   1   |||||||||||||||||||||=|| targets:93   CAAUCCCACUCAAUCCACAUGGAU   116 Target Full Sequence	1.5	Sequence 3966 from Patent EP2985353	NA	coding protein	psRNATarget
HI405841.1	ncRNA:24   GUUAGGGUGAGUUAGGUGUACUUA   1   |||||||||||||||||||||=|| targets:93   CAAUCCCACUCAAUCCACAUGGAU   116 Target Full Sequence	1.5	Sequence 3966 from Patent EP2074227	NA	coding protein	psRNATarget
JB166302.1	ncRNA:24   GUUAGGGUGAGUUAGGUGUACUUA   1   |||||||||||||||||||||=|| targets:93   CAAUCCCACUCAAUCCACAUGGAU   116 Target Full Sequence	1.5	Sequence 3966 from Patent EP2559767	NA	coding protein	psRNATarget
LQ238032.1	ncRNA:24   GUUAGGGUGAGUUAGGUGUACUUA   1   |||||||||||||||||||||=|| targets:84   CAAUCCCACUCAAUCCACAUGGAU   107 Target Full Sequence	1.5	Sequence 4027 from Patent EP2985353	NA	coding protein	psRNATarget
HI405902.1	ncRNA:24   GUUAGGGUGAGUUAGGUGUACUUA   1   |||||||||||||||||||||=|| targets:84   CAAUCCCACUCAAUCCACAUGGAU   107 Target Full Sequence	1.5	Sequence 4027 from Patent EP2074227	NA	coding protein	psRNATarget
JB166363.1	ncRNA:24   GUUAGGGUGAGUUAGGUGUACUUA   1   |||||||||||||||||||||=|| targets:84   CAAUCCCACUCAAUCCACAUGGAU   107 Target Full Sequence	1.5	Sequence 4027 from Patent EP2559767	NA	coding protein	psRNATarget
HI405889.1	ncRNA:24   GUUAGGGUGAGUUAGGUGUACUUA   1   |||||||||||||||||||||=|| targets:83   CAAUCCCACUCAAUCCACAUGGAU   106 Target Full Sequence	1.5	Sequence 4014 from Patent EP2074227	NA	coding protein	psRNATarget
JB166350.1	ncRNA:24   GUUAGGGUGAGUUAGGUGUACUUA   1   |||||||||||||||||||||=|| targets:83   CAAUCCCACUCAAUCCACAUGGAU   106 Target Full Sequence	1.5	Sequence 4014 from Patent EP2559767	NA	coding protein	psRNATarget
LQ238019.1	ncRNA:24   GUUAGGGUGAGUUAGGUGUACUUA   1   |||||||||||||||||||||=|| targets:83   CAAUCCCACUCAAUCCACAUGGAU   106 Target Full Sequence	1.5	Sequence 4014 from Patent EP2985353	NA	coding protein	psRNATarget
XM_020542399.1	ncRNA:24   GUUAGGGUGAGUUAGGUGUACUUA   1   ||||||||||=||||||||||=|| targets:7264   CAAUCCCACUUAAUCCACAUGGAU   7287 Target Full Sequence	2.5	PREDICTED: Zea mays acyl-coenzyme A thioesterase 13 (LOC103635012), transcript variant X3, mRNA	NA	coding protein	psRNATarget
XM_008657578.2	ncRNA:24   GUUAGGGUGAGUUAGGUGUACUUA   1   ||||||||||=||||||||||=|| targets:7253   CAAUCCCACUUAAUCCACAUGGAU   7276 Target Full Sequence	2.5	PREDICTED: Zea mays acyl-coenzyme A thioesterase 13 (LOC103635012), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_008657579.2	ncRNA:24   GUUAGGGUGAGUUAGGUGUACUUA   1   ||||||||||=||||||||||=|| targets:7149   CAAUCCCACUUAAUCCACAUGGAU   7172 Target Full Sequence	2.5	PREDICTED: Zea mays acyl-coenzyme A thioesterase 13 (LOC103635012), transcript variant X4, mRNA	NA	coding protein	psRNATarget
XM_020539703.1	ncRNA:24   GUUAGGGUGAGUUAGGUGUACUUA   1   |||||||=|||||||||||||=|| targets:64   CAAUCCCGCUCAAUCCACAUGGAU   87 Target Full Sequence	2.5	PREDICTED: Zea mays uncharacterized LOC109940256 (LOC109940256), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_020541448.1	ncRNA:24   GUUAGGGUGAGUUAGGUGUACUUA   1   |||||||=|||||||||||||=|| targets:2908   CAAUCCCGCUCAAUCCACAUGGAU   2931 Target Full Sequence	2.5	PREDICTED: Zea mays uncharacterized LOC103634414 (LOC103634414), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_020541449.1	ncRNA:24   GUUAGGGUGAGUUAGGUGUACUUA   1   |||||||=|||||||||||||=|| targets:2804   CAAUCCCGCUCAAUCCACAUGGAU   2827 Target Full Sequence	2.5	PREDICTED: Zea mays uncharacterized LOC103634414 (LOC103634414), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_020549703.1	ncRNA:24   GUUAGGGUGAGUUAGGUGUACUUA   1   |||||=|||||||||||||||=|| targets:2352   CAAUCUCACUCAAUCCACAUGGAU   2375 Target Full Sequence	2.5	PREDICTED: Zea mays protein kinase domain containing protein (LOC100281444), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_020549704.1	ncRNA:24   GUUAGGGUGAGUUAGGUGUACUUA   1   |||||=|||||||||||||||=|| targets:2292   CAAUCUCACUCAAUCCACAUGGAU   2315 Target Full Sequence	2.5	PREDICTED: Zea mays protein kinase domain containing protein (LOC100281444), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_008674604.2	ncRNA:24   GUUAGGGUGAGUUAGGUGUACUUA   1   |||||=|||||||||||||||=|| targets:2285   CAAUCUCACUCAAUCCACAUGGAU   2308 Target Full Sequence	2.5	PREDICTED: Zea mays protein kinase domain containing protein (LOC100281444), transcript variant X3, mRNA	NA	coding protein	psRNATarget
EU956718.1	ncRNA:24   GUUAGGGUGAGUUAGGUGUACUUA   1   |||||=|||||||||||||||=|| targets:2157   CAAUCUCACUCAAUCCACAUGGAU   2180 Target Full Sequence	2.5	Zea mays clone 1571610 protein kinase domain containing protein mRNA, complete cds	NA	coding protein	psRNATarget
NM_001154362.2	ncRNA:24   GUUAGGGUGAGUUAGGUGUACUUA   1   |||||=|||||||||||||||=|| targets:2156   CAAUCUCACUCAAUCCACAUGGAU   2179 Target Full Sequence	2.5	Zea mays protein kinase domain containing protein (LOC100281444), mRNA	NA	coding protein	psRNATarget
BT063416.1	ncRNA:24   GUUAGGGUGAGUUAGGUGUACUUA   1   |||||=|||||||||||||||=|| targets:2084   CAAUCUCACUCAAUCCACAUGGAU   2107 Target Full Sequence	2.5	Zea mays full-length cDNA clone ZM_BFc0061L20 mRNA, complete cds	NA	coding protein	psRNATarget
XM_008664275.2	ncRNA:24   GUUAGGGUGAGUUAGGUGUACUUA   1   |||||||=|||||||||||||=|| targets:2144   CAAUCCCGCUCAAUCCACAUGGAU   2167 Target Full Sequence	2.5	PREDICTED: Zea mays DEAD-box ATP-dependent RNA helicase 27 (LOC103640803), transcript variant X1, mRNA	NA	coding protein	psRNATarget
BT018903.1	ncRNA:24   GUUAGGGUGAGUUAGGUGUACUUA   1   |||||||=|||||||||||||=|| targets:2033   CAAUCCCGCUCAAUCCACAUGGAU   2056 Target Full Sequence	2.5	Zea mays clone EL01T0208C03.d mRNA sequence	NA	coding protein	psRNATarget
XM_008664276.2	ncRNA:24   GUUAGGGUGAGUUAGGUGUACUUA   1   |||||||=|||||||||||||=|| targets:2051   CAAUCCCGCUCAAUCCACAUGGAU   2074 Target Full Sequence	2.5	PREDICTED: Zea mays DEAD-box ATP-dependent RNA helicase 27 (LOC103640803), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_008645867.2	ncRNA:24   GUUAGGGUGAGUUAGGUGUACUUA   1   |||||||=|||||||||||||=|| targets:1956   CAAUCCCGCUCAAUCCACAUGGAU   1979 Target Full Sequence	2.5	PREDICTED: Zea mays Serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B beta isoform (LOC100383610), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_020553538.1	ncRNA:24   GUUAGGGUGAGUUAGGUGUACUUA   1   |||||||=|||||||||||||=|| targets:1890   CAAUCCCGCUCAAUCCACAUGGAU   1913 Target Full Sequence	2.5	PREDICTED: Zea mays Serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B beta isoform (LOC100383610), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_008645912.2	ncRNA:24   GUUAGGGUGAGUUAGGUGUACUUA   1   |||||||=|||||||||||||=|| targets:1623   CAAUCCCGCUCAAUCCACAUGGAU   1646 Target Full Sequence	2.5	PREDICTED: Zea mays uncharacterized LOC100383981 (LOC100383981), transcript variant X1, mRNA	NA	coding protein	psRNATarget
BT061560.1	ncRNA:24   GUUAGGGUGAGUUAGGUGUACUUA   1   |||||=|||||||||||||||=|| targets:1447   CAAUCUCACUCAAUCCACAUGGAU   1470 Target Full Sequence	2.5	Zea mays full-length cDNA clone ZM_BFb0158C09 mRNA, complete cds	NA	coding protein	psRNATarget
NM_001174368.1	ncRNA:24   GUUAGGGUGAGUUAGGUGUACUUA   1   |||||=|||||||||||||||=|| targets:1447   CAAUCUCACUCAAUCCACAUGGAU   1470 Target Full Sequence	2.5	Zea mays hypothetical protein (LOC100381539), mRNA	NA	coding protein	psRNATarget
NM_001176594.1	ncRNA:24   GUUAGGGUGAGUUAGGUGUACUUA   1   |||||||=|||||||||||||=|| targets:1132   CAAUCCCGCUCAAUCCACAUGGAU   1155 Target Full Sequence	2.5	Zea mays uncharacterized LOC100383981 (LOC100383981), mRNA	NA	coding protein	psRNATarget
BT068797.1	ncRNA:24   GUUAGGGUGAGUUAGGUGUACUUA   1   |||||||=|||||||||||||=|| targets:1132   CAAUCCCGCUCAAUCCACAUGGAU   1155 Target Full Sequence	2.5	Zea mays full-length cDNA clone ZM_BFb0382L20 mRNA, complete cds	NA	coding protein	psRNATarget
BT062183.2	ncRNA:24   GUUAGGGUGAGUUAGGUGUACUUA   1   |||||=|||||||||||||||=|| targets:250   CAAUCUCACUCAAUCCACAUGGAU   273 Target Full Sequence	2.5	Zea mays full-length cDNA clone ZM_BFb0224O15 mRNA, complete cds	NA	coding protein	psRNATarget
BT086633.1	ncRNA:24   GUUAGGGUGAGUUAGGUGUACUUA   1   |||||=|||||||||||||||=|| targets:459   CAAUCUCACUCAAUCCACAUGGAU   482 Target Full Sequence	2.5	Zea mays full-length cDNA clone ZM_BFa0068P14 mRNA, complete cds	NA	coding protein	psRNATarget
HI403019.1	ncRNA:24   GUUAGGGUGAGUUAGGUGUACUUA   1   ||||||||||=||||||||||=|| targets:102   CAAUCCCACUUAAUCCACAUGGAU   125 Target Full Sequence	2.5	Sequence 1144 from Patent EP2074227	NA	coding protein	psRNATarget
HI403043.1	ncRNA:24   GUUAGGGUGAGUUAGGUGUACUUA   1   |||||=||=||||||||||||||| targets:102   CAAUCUCAUUCAAUCCACAUGAAU   125 Target Full Sequence	2.0	Sequence 1168 from Patent EP2074227	NA	coding protein	psRNATarget
JB163480.1	ncRNA:24   GUUAGGGUGAGUUAGGUGUACUUA   1   ||||||||||=||||||||||=|| targets:102   CAAUCCCACUUAAUCCACAUGGAU   125 Target Full Sequence	2.5	Sequence 1144 from Patent EP2559767	NA	coding protein	psRNATarget
LQ235149.1	ncRNA:24   GUUAGGGUGAGUUAGGUGUACUUA   1   ||||||||||=||||||||||=|| targets:102   CAAUCCCACUUAAUCCACAUGGAU   125 Target Full Sequence	2.5	Sequence 1144 from Patent EP2985353	NA	coding protein	psRNATarget
JB163504.1	ncRNA:24   GUUAGGGUGAGUUAGGUGUACUUA   1   |||||=||=||||||||||||||| targets:102   CAAUCUCAUUCAAUCCACAUGAAU   125 Target Full Sequence	2.0	Sequence 1168 from Patent EP2559767	NA	coding protein	psRNATarget
LQ235173.1	ncRNA:24   GUUAGGGUGAGUUAGGUGUACUUA   1   |||||=||=||||||||||||||| targets:102   CAAUCUCAUUCAAUCCACAUGAAU   125 Target Full Sequence	2.0	Sequence 1168 from Patent EP2985353	NA	coding protein	psRNATarget
HI405878.1	ncRNA:24   GUUAGGGUGAGUUAGGUGUACUUA   1   |||||=|||||||||||||||=|| targets:95   CAAUCUCACUCAAUCCACAUGGAU   118 Target Full Sequence	2.5	Sequence 4003 from Patent EP2074227	NA	coding protein	psRNATarget
LQ238008.1	ncRNA:24   GUUAGGGUGAGUUAGGUGUACUUA   1   |||||=|||||||||||||||=|| targets:95   CAAUCUCACUCAAUCCACAUGGAU   118 Target Full Sequence	2.5	Sequence 4003 from Patent EP2985353	NA	coding protein	psRNATarget
JB166339.1	ncRNA:24   GUUAGGGUGAGUUAGGUGUACUUA   1   |||||=|||||||||||||||=|| targets:95   CAAUCUCACUCAAUCCACAUGGAU   118 Target Full Sequence	2.5	Sequence 4003 from Patent EP2559767	NA	coding protein	psRNATarget
LQ238007.1	ncRNA:24   GUUAGGGUGAGUUAGGUGUACUUA   1   |||||=|||||||||||||||=|| targets:91   CAAUCUCACUCAAUCCACAUGGAU   114 Target Full Sequence	2.5	Sequence 4002 from Patent EP2985353	NA	coding protein	psRNATarget
JB166338.1	ncRNA:24   GUUAGGGUGAGUUAGGUGUACUUA   1   |||||=|||||||||||||||=|| targets:91   CAAUCUCACUCAAUCCACAUGGAU   114 Target Full Sequence	2.5	Sequence 4002 from Patent EP2559767	NA	coding protein	psRNATarget
HI405877.1	ncRNA:24   GUUAGGGUGAGUUAGGUGUACUUA   1   |||||=|||||||||||||||=|| targets:91   CAAUCUCACUCAAUCCACAUGGAU   114 Target Full Sequence	2.5	Sequence 4002 from Patent EP2074227	NA	coding protein	psRNATarget
JB166354.1	ncRNA:24   GUUAGGGUGAGUUAGGUGUACUUA   1   |||||=|||||||||||||||=|| targets:83   CAAUCUCACUCAAUCCACAUGGAU   106 Target Full Sequence	2.5	Sequence 4018 from Patent EP2559767	NA	coding protein	psRNATarget
HI405893.1	ncRNA:24   GUUAGGGUGAGUUAGGUGUACUUA   1   |||||=|||||||||||||||=|| targets:83   CAAUCUCACUCAAUCCACAUGGAU   106 Target Full Sequence	2.5	Sequence 4018 from Patent EP2074227	NA	coding protein	psRNATarget
LQ238023.1	ncRNA:24   GUUAGGGUGAGUUAGGUGUACUUA   1   |||||=|||||||||||||||=|| targets:83   CAAUCUCACUCAAUCCACAUGGAU   106 Target Full Sequence	2.5	Sequence 4018 from Patent EP2985353	NA	coding protein	psRNATarget
EZ092645.1	ncRNA:24   GUUAGGGUGAGUUAGGUGUACUUA   1   |||||=|||||||||||||||=|| targets:20   CAAUCUCACUCAAUCCACAUGGAU   43 Target Full Sequence	2.5	TSA: Zea mays contig28294, mRNA sequence	NA	coding protein	psRNATarget
XM_008675817.2	ncRNA:24   GUUAGGGUGAGUUAGGUGUACUUA   1   |||||||||||||||||||||=|* targets:4061   CAAUCCCACUCAAUCCACAUGGAA   4084 Target Full Sequence	2.5	PREDICTED: Zea mays probable chromatin-remodeling complex ATPase chain (LOC103650180), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_008674375.2	ncRNA:24   GUUAGGGUGAGUUAGGUGUACUUA   1   =||||=|||||||||||||||=|| targets:3442   UAAUCUCACUCAAUCCACAUGGAU   3465 Target Full Sequence	2.5	PREDICTED: Zea mays uncharacterized LOC100276614 (LOC100276614), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_008674375.2	ncRNA:24   GUUAGGGUGAGUUAGGUGUACUUA   1   =|*|=||*|||||||||||||=|| targets:3516   UAUUUCCUCUCAAUCCACAUGGAU   3539 Target Full Sequence	2.5	PREDICTED: Zea mays uncharacterized LOC100276614 (LOC100276614), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_008674376.2	ncRNA:24   GUUAGGGUGAGUUAGGUGUACUUA   1   =||||=|||||||||||||||=|| targets:3411   UAAUCUCACUCAAUCCACAUGGAU   3434 Target Full Sequence	2.5	PREDICTED: Zea mays uncharacterized LOC100276614 (LOC100276614), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_008674376.2	ncRNA:24   GUUAGGGUGAGUUAGGUGUACUUA   1   =|*|=||*|||||||||||||=|| targets:3485   UAUUUCCUCUCAAUCCACAUGGAU   3508 Target Full Sequence	2.5	PREDICTED: Zea mays uncharacterized LOC100276614 (LOC100276614), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_008674377.2	ncRNA:24   GUUAGGGUGAGUUAGGUGUACUUA   1   =||||=|||||||||||||||=|| targets:3398   UAAUCUCACUCAAUCCACAUGGAU   3421 Target Full Sequence	2.5	PREDICTED: Zea mays uncharacterized LOC100276614 (LOC100276614), transcript variant X3, mRNA	NA	coding protein	psRNATarget
XM_008674377.2	ncRNA:24   GUUAGGGUGAGUUAGGUGUACUUA   1   =|*|=||*|||||||||||||=|| targets:3472   UAUUUCCUCUCAAUCCACAUGGAU   3495 Target Full Sequence	2.5	PREDICTED: Zea mays uncharacterized LOC100276614 (LOC100276614), transcript variant X3, mRNA	NA	coding protein	psRNATarget
XM_008678388.2	ncRNA:24   GUUAGGGUGAGUUAGGUGUACUUA   1   |||||||||*|||||||||||=|| targets:1831   CAAUCCCACCCAAUCCACAUGGAU   1854 Target Full Sequence	2.5	PREDICTED: Zea mays RNA-binding motif protein, X-linked 2 (LOC100282627), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_008678390.2	ncRNA:24   GUUAGGGUGAGUUAGGUGUACUUA   1   |||||||||*|||||||||||=|| targets:1815   CAAUCCCACCCAAUCCACAUGGAU   1838 Target Full Sequence	2.5	PREDICTED: Zea mays RNA-binding motif protein, X-linked 2 (LOC100282627), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_008659614.2	ncRNA:24   GUUAGGGUGAGUUAGGUGUACUUA   1   |||||||||*|||||||||||=|| targets:189   CAAUCCCACACAAUCCACAUGGAU   212 Target Full Sequence	2.5	PREDICTED: Zea mays mitogen-activated protein kinase kinase kinase A (LOC103637414), mRNA	NA	coding protein	psRNATarget
HI409215.1	ncRNA:24   GUUAGGGUGAGUUAGGUGUACUUA   1   |||||||||*=||||||||||||| targets:78   CAAUCCCACCUAAUCCACAUGAAU   101 Target Full Sequence	2.0	Sequence 7340 from Patent EP2074227	NA	coding protein	psRNATarget
LQ241402.1	ncRNA:24   GUUAGGGUGAGUUAGGUGUACUUA   1   |||||||||*|||||||||||=|| targets:78   CAAUCCCACCCAAUCCACAUGGAU   101 Target Full Sequence	2.5	Sequence 7397 from Patent EP2985353	NA	coding protein	psRNATarget
LQ241345.1	ncRNA:24   GUUAGGGUGAGUUAGGUGUACUUA   1   |||||||||*=||||||||||||| targets:78   CAAUCCCACCUAAUCCACAUGAAU   101 Target Full Sequence	2.0	Sequence 7340 from Patent EP2985353	NA	coding protein	psRNATarget
JB169733.1	ncRNA:24   GUUAGGGUGAGUUAGGUGUACUUA   1   |||||||||*|||||||||||=|| targets:78   CAAUCCCACCCAAUCCACAUGGAU   101 Target Full Sequence	2.5	Sequence 7397 from Patent EP2559767	NA	coding protein	psRNATarget
HI409272.1	ncRNA:24   GUUAGGGUGAGUUAGGUGUACUUA   1   |||||||||*|||||||||||=|| targets:78   CAAUCCCACCCAAUCCACAUGGAU   101 Target Full Sequence	2.5	Sequence 7397 from Patent EP2074227	NA	coding protein	psRNATarget
JB169676.1	ncRNA:24   GUUAGGGUGAGUUAGGUGUACUUA   1   |||||||||*=||||||||||||| targets:78   CAAUCCCACCUAAUCCACAUGAAU   101 Target Full Sequence	2.0	Sequence 7340 from Patent EP2559767	NA	coding protein	psRNATarget
BT066441.1	ncRNA:24   GUUAGGGUGAGUUAGGUGUACUUA   1   =||||||||*|||||||||||=|| targets:1531   UAAUCCCACCCAAUCCACAUGGAU   1554 Target Full Sequence	2.5	Zea mays full-length cDNA clone ZM_BFc0165B04 mRNA, complete cds	NA	coding protein	psRNATarget
BT018999.1	ncRNA:24   GUUAGGGUGAGUUAGGUGUACUUA   1   =||||||*|||||||||=|||||| targets:465   UAAUCCCUCUCAAUCCAUAUGAAU   488 Target Full Sequence	2.5	Zea mays clone Contig487.F mRNA sequence	NA	coding protein	psRNATarget
EU952677.1	ncRNA:24   GUUAGGGUGAGUUAGGUGUACUUA   1   =|||*||||||||||||||||=|| targets:989   UAAUACCACUCAAUCCACAUGGAU   1012 Target Full Sequence	1.5	Zea mays clone 1286167 mitochondrial glycoprotein mRNA, complete cds; nuclear gene for mitochondrial product	NA	coding protein	psRNATarget
BT042439.1	ncRNA:24   GUUAGGGUGAGUUAGGUGUACUUA   1   =|||*||||||||||||||||=|| targets:967   UAAUACCACUCAAUCCACAUGGAU   990 Target Full Sequence	1.5	Zea mays full-length cDNA clone ZM_BFb0234C02 mRNA, complete cds	NA	coding protein	psRNATarget
BT066125.1	ncRNA:24   GUUAGGGUGAGUUAGGUGUACUUA   1   =|||*||||||||||||||||=|| targets:1076   UAAUACCACUCAAUCCACAUGGAU   1099 Target Full Sequence	1.5	Zea mays full-length cDNA clone ZM_BFb0377H04 mRNA, complete cds	NA	coding protein	psRNATarget
XM_020546921.1	ncRNA:24   GUUAGGGUGAGUUAGGUGUACUUA   1   ||||==|||*=||||||||||||| targets:2799   CAAUUUCACCUAAUCCACAUGAAU   2822 Target Full Sequence	3.0	PREDICTED: Zea mays uncharacterized LOC109943544 (LOC109943544), mRNA	NA	coding protein	psRNATarget
XM_008649520.2	ncRNA:24   GUUAGGGUGAGUUAGGUGUACUUA   1   ||||**|||||||||||||||=|| targets:1044   CAAUAACACUCAAUCCACAUGGAU   1067 Target Full Sequence	2.5	PREDICTED: Zea mays glycosyltransferase family protein 28 (IDP1988), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_008649521.2	ncRNA:24   GUUAGGGUGAGUUAGGUGUACUUA   1   ||||**|||||||||||||||=|| targets:1015   CAAUAACACUCAAUCCACAUGGAU   1038 Target Full Sequence	2.5	PREDICTED: Zea mays glycosyltransferase family protein 28 (IDP1988), transcript variant X2, mRNA	NA	coding protein	psRNATarget
BT055408.1	ncRNA:24   GUUAGGGUGAGUUAGGUGUACUUA   1   ||||**|||||||||||||||=|| targets:963   CAAUAACACUCAAUCCACAUGGAU   986 Target Full Sequence	2.5	Zea mays full-length cDNA clone ZM_BFb0147G07 mRNA, complete cds	NA	coding protein	psRNATarget
NM_001152975.1	ncRNA:24   GUUAGGGUGAGUUAGGUGUACUUA   1   ||||**|||||||||||||||=|| targets:963   CAAUAACACUCAAUCCACAUGGAU   986 Target Full Sequence	2.5	Zea mays glycosyltransferase family protein 28 (IDP1988), mRNA	NA	coding protein	psRNATarget
EZ069047.1	ncRNA:24   GUUAGGGUGAGUUAGGUGUACUUA   1   ||||**|||||||||||||||=|| targets:29   CAAUAACACUCAAUCCACAUGGAU   52 Target Full Sequence	2.5	TSA: Zea mays contig04682, mRNA sequence	NA	coding protein	psRNATarget