ncRNA ID | novel_zma_miR2629 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr10:67600591-67600671 [+] |
Reference genome | RefGen_v4 |
Source | SRR2089713 |
Length | 24 |
Mature sequence(if miRNA) | 58 - CGAAAAAAACACUCGGCAAAGAAU - 81 |
Stem-loop(if miRNA) |
--     UA     G       G  U              A   UCUUU  CUGAG GUUUUUU CG GGCACUCGGCAAAG G   |||||  ||||| ||||||| || |||||||||||||| C   AGAAA  GGCUC CAAAAAA GC CCGUGAGCCGUUUC U UA     -C     A       A  -              U |
Stem-loop sequence | UCUUUUACUGAGGGUUUUUUGCGUGGCACUCGGCAAAGAGCUUCUUUGCCGAGUGCCCGAAAAAAACACUCGGCAAAGAAU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
EU949560.1 |
|
0.0 | Zea mays clone 424771 mRNA sequence | NA | coding protein | psRNATarget | |||||||||
LQ238823.1 |
|
2.5 | Sequence 4818 from Patent EP2985353 | NA | coding protein | psRNATarget | |||||||||
JB167154.1 |
|
2.5 | Sequence 4818 from Patent EP2559767 | NA | coding protein | psRNATarget | |||||||||
HI406693.1 |
|
2.5 | Sequence 4818 from Patent EP2074227 | NA | coding protein | psRNATarget |