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BaseInfo

ncRNA ID novel_zma_miR2629
Species Zea mays
Class miRNA
Genome position Chr10:67600591-67600671 [+]
Reference genome RefGen_v4
Source SRR2089713
Length 24
Mature sequence(if miRNA) 58 - CGAAAAAAACACUCGGCAAAGAAU - 81
Stem-loop(if miRNA) --     UA     G       G  U              A
  UCUUU  CUGAG GUUUUUU CG GGCACUCGGCAAAG G
  |||||  ||||| ||||||| || |||||||||||||| C
  AGAAA  GGCUC CAAAAAA GC CCGUGAGCCGUUUC U
UA     -C     A       A  -              U
Stem-loop sequence UCUUUUACUGAGGGUUUUUUGCGUGGCACUCGGCAAAGAGCUUCUUUGCCGAGUGCCCGAAAAAAACACUCGGCAAAGAAU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
EU949560.1
ncRNA:24   UAAGAAACGGCUCACAAAAAAAGC   1
  =|||||||||||||||||||||||
targets:592   GUUCUUUGCCGAGUGUUUUUUUCG   615

0.0 Zea mays clone 424771 mRNA sequence NA coding protein psRNATarget
LQ238823.1
ncRNA:24   UAAGAAACGGCUCACAAAAAAAGC   1
  =*||||||||||||||||||||=*
targets:107   GCUCUUUGCCGAGUGUUUUUUUUC   130

2.5 Sequence 4818 from Patent EP2985353 NA coding protein psRNATarget
JB167154.1
ncRNA:24   UAAGAAACGGCUCACAAAAAAAGC   1
  =*||||||||||||||||||||=*
targets:107   GCUCUUUGCCGAGUGUUUUUUUUC   130

2.5 Sequence 4818 from Patent EP2559767 NA coding protein psRNATarget
HI406693.1
ncRNA:24   UAAGAAACGGCUCACAAAAAAAGC   1
  =*||||||||||||||||||||=*
targets:107   GCUCUUUGCCGAGUGUUUUUUUUC   130

2.5 Sequence 4818 from Patent EP2074227 NA coding protein psRNATarget