ncRNA ID | novel_zma_miR2623 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr5:221706075-221706286 [-] |
Reference genome | RefGen_v4 |
Source | SRR1583944;SRR1583942 |
Length | 24 |
Mature sequence(if miRNA) | 1 - UAAGCUGGUGUGUUUGGAACCACC - 24 |
Stem-loop(if miRNA) |
--                        A   -   A       A         C        A     C          UCAC     GCUAAAAAAU   AG          UGGUUCCAAACAUACCGGUUUAUA CUC AGU UAUAGAA UUGGAUUCU AGUUUUUU AAAAC AAGAAGCUGG    UCCUG          AAA  CAGUUUCU   |||||||||||||||||||||||| ||| ||| ||||||| ||||||||| |||||||| ||||| ||||||||||    |||||          |||  |||||||U   ACCAAGGUUUGUGUGGUCGAAUAU GGG UUA AUAUCUU GACCUAAGA UCAAAGAA UUUUG UUUUUUGAUC    AGGAC          UUU  GUCAAAGA CC                        -   A   A       A         A        G     U          ---C     --AAACCUUC   GA        |
Stem-loop sequence | UGGUUCCAAACAUACCGGUUUAUAACUCAGUAUAUAGAAAUUGGAUUCUCAGUUUUUUAAAAACCAAGAAGCUGGUCACUCCUGGCUAAAAAAUAAAAGCAGUUUCUUAGAAACUGAGUUUCUUCCAAACAGGACCUAGUUUUUUUGUUUUGAAGAAACUAAGAAUCCAGAUUCUAUAAAUUAGGGUAUAAGCUGGUGUGUUUGGAACCACC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_008664904.2 |
|
2.5 | PREDICTED: Zea mays uncharacterized LOC103641558 (LOC103641558), mRNA | NA | coding protein | psRNATarget |