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BaseInfo

ncRNA ID novel_zma_miR2621
Species Zea mays
Class miRNA
Genome position Chr4:10749226-10749311 [-]
Reference genome RefGen_v4
Source SRR2089713
Length 24
Mature sequence(if miRNA) 1 - AAAUACGUAUUAUAUUCGUCGGCC - 24
Stem-loop(if miRNA) --        A     UUU                 GCCAACGA
  CCGACGAA AUAAU   UGUAUUUUCGUGGGCUU        A
  |||||||| |||||   |||||||||||||||||
  GGCUGCUU UAUUA   GCAUAAAAGCACCCGGG        A
CC        A     --U                 UAAUUAUA
Stem-loop sequence CCGACGAAAAUAAUUUUUGUAUUUUCGUGGGCUUGCCAACGAAAAUAUUAAUGGGCCCACGAAAAUACGUAUUAUAUUCGUCGGCC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
BT042581.1
ncRNA:24   CCGGCUGCUUAUAUUAUGCAUAAA   1
  ||||||||||||||||||||||||
targets:407   GGCCGACGAAUAUAAUACGUAUUU   430

0.0 Zea mays full-length cDNA clone ZM_BFb0345H15 mRNA, complete cds NA coding protein psRNATarget