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BaseInfo

ncRNA ID osa-miR6255
Species Oryza sativa
Class miRNA
Genome position Chr7:25018786-25018870 [-]
Reference genome MSU7
Source miRBase
Length 22
Mature sequence(if miRNA) 54 - UGGGAAAAAUGGGCAGUUGAGU - 75
Stem-loop(if miRNA) AAACCAGUUU            GCA      UUC     AUU
          UGGGAAAAAUGG   GUUGAG   GGCCA   U
          ||||||||||||   ||||||   |||||   A
          ACCCUUUUUACU   CAACUC   UUGGU   U
ACUAUUGUAC            -AA      -CU     AUC
Stem-loop sequence AAACCAGUUUUGGGAAAAAUGGGCAGUUGAGUUCGGCCAAUUUAUCUAUGGUUUCCUCAACAAUCAUUUUUCCCACAUGUUAUCA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
AK288746.1
ncRNA:22   UGAGUUGACGGGUAAAAAGGGU   1
  ||||||||||||||||||||||
targets:217   ACUCAACUGCCCAUUUUUCCCA   238

0.0 Oryza sativa Japonica Group cDNA, clone: J090064I03, full insert sequence NA coding protein psRNATarget

Reference

1 PMID:22585409
"Novel miRNAs in the control of arsenite levels in rice";
Liu Q;
Funct Integr Genomics. 12:649-658(2012).