ncRNA ID | osa-miR6255 |
Species | Oryza sativa |
Class | miRNA |
Genome position | Chr7:25018786-25018870 [-] |
Reference genome | MSU7 |
Source | miRBase |
Length | 22 |
Mature sequence(if miRNA) | 54 - UGGGAAAAAUGGGCAGUUGAGU - 75 |
Stem-loop(if miRNA) |
AAACCAGUUU            GCA      UUC     AUU           UGGGAAAAAUGG   GUUGAG   GGCCA   U           ||||||||||||   ||||||   |||||   A           ACCCUUUUUACU   CAACUC   UUGGU   U ACUAUUGUAC            -AA      -CU     AUC |
Stem-loop sequence | AAACCAGUUUUGGGAAAAAUGGGCAGUUGAGUUCGGCCAAUUUAUCUAUGGUUUCCUCAACAAUCAUUUUUCCCACAUGUUAUCA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
AK288746.1 |
|
0.0 | Oryza sativa Japonica Group cDNA, clone: J090064I03, full insert sequence | NA | coding protein | psRNATarget |
1 | PMID:22585409
"Novel miRNAs in the control of arsenite levels in rice"; Liu Q; Funct Integr Genomics. 12:649-658(2012). |