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BaseInfo

ncRNA ID novel_zma_miR2609
Species Zea mays
Class miRNA
Genome position Chr5:223073547-223073615 [-]
Reference genome RefGen_v4
Source SRR1583944;SRR2638137;SRR2647343;SRR2647388;SRR2647389;SRR2647391
Length 24
Mature sequence(if miRNA) 46 - UGUUCUCUGGUCAGGCGCGGACGG - 69
Stem-loop(if miRNA) --U  U   UG      -       G     CG   
   GU CUC  GUCAGG CGCGGAC GUCCG  GCCC
   || |||  |||||| ||||||| |||||  |||A
   CG GAG  CGGUCC GCGCCUG CAGGC  UGGG
CGG  -   CA      A       G     --   
Stem-loop sequence UGUUCUCUGGUCAGGCGCGGACGGUCCGCGGCCCAGGGUCGGACGGUCCGCGACCUGGCACGAGGCGGC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
EZ096610.1
ncRNA:24   GGCAGGCGCGGACUGGUCUCUUGU   1
  |||||||||=|||||||||||=||
targets:27   CCGUCCGCGUCUGACCAGAGAGCA   50

2.5 TSA: Zea mays contig32265, mRNA sequence NA coding protein psRNATarget