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BaseInfo

ncRNA ID	novel_zma_miR2607
Species	Zea mays
Class	miRNA
Genome position	Chr10:2356355-2356488 [-]
Reference genome	RefGen_v4
Source	SRR2089713
Length	24
Mature sequence(if miRNA)	111 - AGGGCUAAUUUGGUGGUAAGGGAU - 134
Stem-loop(if miRNA)	--      A        G                                    C    CA     A   AGGGCU AUUUGGUG UAAGGGAUCCCAAGGGGAUCCAUGGGGGAGAAAUCC CUUG  AUUCA U   |||||| |||||||| |||||||||||||||||||||||||||||||||||| ||||  |||||   UCCCGA UAAACCAC AUUCCCUAGGGUUCCCCUAGGUACCCCCUCUUUAGG GAAC  UAAGU U AA      C        G                                    U    AA     U
Stem-loop sequence	AGGGCUAAUUUGGUGGUAAGGGAUCCCAAGGGGAUCCAUGGGGGAGAAAUCCCCUUGCAAUUCAAUUUUGAAUAACAAGUGGAUUUCUCCCCCAUGGAUCCCCUUGGGAUCCCUUAGCACCAAAUCAGCCCUAA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
EU941529.1	ncRNA:24   UAGGGAAUGGUGGUUUAAUCGGGA   1   ||||||||||||||||||||||=* targets:16   AUCCCUUACCACCAAAUUAGCCUG   39 Target Full Sequence	2.5	Zea mays clone 1459685 mRNA sequence	NA	coding protein	psRNATarget
BT068562.1	ncRNA:24   UAGGGAAUGGUGGUUUAAUCGGGA   1   ||||||*|=||||||||||||||| targets:1077   AUCCCUAAUCACCAAAUUAGCCCU   1100 Target Full Sequence	2.0	Zea mays full-length cDNA clone ZM_BFb0331B04 mRNA, complete cds	NA	coding protein	psRNATarget
NM_001175907.1	ncRNA:24   UAGGGAAUGGUGGUUUAAUCGGGA   1   ||||||*||||||||||*|||||| targets:1339   AUCCCUAACCACCAAAUCAGCCCU   1362 Target Full Sequence	2.5	Zea mays CCAAT-HAP2 transcription factor (CA2P12), mRNA	NA	coding protein	psRNATarget
BT066676.1	ncRNA:24   UAGGGAAUGGUGGUUUAAUCGGGA   1   ||||||*||||||||||*|||||| targets:1339   AUCCCUAACCACCAAAUCAGCCCU   1362 Target Full Sequence	2.5	Zea mays full-length cDNA clone ZM_BFb0044C22 mRNA, complete cds	NA	coding protein	psRNATarget