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BaseInfo

ncRNA ID novel_zma_miR2606
Species Zea mays
Class miRNA
Genome position Chr4:170416313-170416464 [-]
Reference genome RefGen_v4
Source SRR2089713
Length 21
Mature sequence(if miRNA) 132 - UAAAUCUAGUGCCUUCAUUUC - 152
Stem-loop(if miRNA) --       A        A             GG    --     --- -- A  G  ACAUAGAAGAGACAGGUGGAGC
  UAAAUCU GUGCCUUC UUUCUCAUCCAGG  GUGA  GGGCA   G  C GU GC                      G
  ||||||| |||||||| |||||||||||||  ||||  |||||   |  | || ||                      G
  AUUUAGA CACGGAAG AAAGAGUAGGUUC  CACU  UCUGU   G  U CA AG                      C
AA       C        C             -A    UA     AAA GA -  A  AAAAUACACUGUGGGAACAACG
Stem-loop sequence UAAAUCUAGUGCCUUCAUUUCUCAUCCAGGGGGUGAGGGCAGCAGUGGCACAUAGAAGAGACAGGUGGAGCGGCGCAACAAGGGUGUCACAUAAAAGAAACUAGGAAAUGUCUAUUCACACUUGGAUGAGAAACGAAGGCACCAGAUUUAAA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
BT087533.2
ncRNA:21   CUUUACUUCCGUGAUCUAAAU   1
  |||||*|||*|||||||||||
targets:1096   GAAAUAAAGACACUAGAUUUA   1116

2.5 Zea mays full-length cDNA clone ZM_BFb0103K23 mRNA, complete cds NA coding protein psRNATarget