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BaseInfo

ncRNA ID novel_zma_miR2605
Species Zea mays
Class miRNA
Genome position Chr5:20903174-20903256 [+]
Reference genome RefGen_v4
Source SRR1583944;SRR1583942
Length 22
Mature sequence(if miRNA) 62 - UCUAGAUGCAUGCUUAAUGGCC - 83
Stem-loop(if miRNA) --  U     G     -      GACAAA    A   AG   AU
  CU UUAAG GUGUA CUAGAC      CUUU CUU  UUG  U
  || ||||| ||||| ||||||      |||| |||  |||
  GG AAUUC UACGU GAUCUG      GAGA GAA  AAC  U
CC  U     G     A      --GCCG    A   --   GU
Stem-loop sequence CUUUUAAGGGUGUACUAGACGACAAACUUUACUUAGUUGAUUUUGCAAAAGAAGAGGCCGGUCUAGAUGCAUGCUUAAUGGCC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
X98279.1
ncRNA:22   CCGGUAAUUCGUA-CGUAGAUCU   1
  *||||||||||||-|||||||||
targets:430   AGCCAUUAAGCAUAGCAUCUAGA   452

3.0 Z.mays high copy dispersed repeat DNA, ZHCR4 NA coding protein psRNATarget