ncRNA ID | novel_zma_miR2605 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr5:20903174-20903256 [+] |
Reference genome | RefGen_v4 |
Source | SRR1583944;SRR1583942 |
Length | 22 |
Mature sequence(if miRNA) | 62 - UCUAGAUGCAUGCUUAAUGGCC - 83 |
Stem-loop(if miRNA) |
--  U     G     -      GACAAA    A   AG   AU   CU UUAAG GUGUA CUAGAC      CUUU CUU  UUG  U   || ||||| ||||| ||||||      |||| |||  |||   GG AAUUC UACGU GAUCUG      GAGA GAA  AAC  U CC  U     G     A      --GCCG    A   --   GU |
Stem-loop sequence | CUUUUAAGGGUGUACUAGACGACAAACUUUACUUAGUUGAUUUUGCAAAAGAAGAGGCCGGUCUAGAUGCAUGCUUAAUGGCC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
X98279.1 |
|
3.0 | Z.mays high copy dispersed repeat DNA, ZHCR4 | NA | coding protein | psRNATarget |