| ncRNA ID | novel_zma_miR2601 |
| Species | Zea mays |
| Class | miRNA |
| Genome position | Chr10:49066391-49066586 [+] |
| Reference genome | RefGen_v4 |
| Source | SRR1583944;SRR2647389;SRR1583943 |
| Length | 24 |
| Mature sequence(if miRNA) | 1 - AAAUUCUUUACAUACCGGAUGUAA - 24 |
| Stem-loop(if miRNA) |
-- U C GAA U AUA -- -CU UAA AGAAAAA UUA G AAAUUCU UA AUACCGGAUGUAAA UAUCUUU ACAGCCCCUCACAU CCA GCUU GGUCCAUA AUAGA CAAA CUAAAGA U ||||||| || |||||||||||||| ||||||| |||||||||||||| ||| |||| |||||||| ||||| |||| ||||||| UUUAAGA AU UAUGGCCUACAUUU AUAGAAA UGUCGGGGAGUGUA GGU UGAG CCGGGUGU UGUCU GUUU GAUUUUU U CU C A ACA - --- AG CCU UUG ------A -UA U |
| Stem-loop sequence | AAAUUCUUUACAUACCGGAUGUAAAGAAUAUCUUUUACAGCCCCUCACAUAUACCAGCUUCUGGUCCAUAUAAAUAGAAGAAAAACAAAUUACUAAAGAGUUUUUUUUAGAUUUUGAUCUGUGUUUGUGGGCCUCCGAGUGAUGGAUGUGAGGGGCUGUAAAGAUAACAUUUACAUCCGGUAUAUACAGAAUUUUC |
| Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| NM_001174772.1 |
|
3.0 | Zea mays uncharacterized LOC100382006 (LOC100382006), mRNA | NA | coding protein | psRNATarget | |||||||||
| BT062864.1 |
|
3.0 | Zea mays full-length cDNA clone ZM_BFc0002K01 mRNA, complete cds | NA | coding protein | psRNATarget |