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BaseInfo

ncRNA ID novel_zma_miR2600
Species Zea mays
Class miRNA
Genome position Chr4:240827843-240827938 [+]
Reference genome RefGen_v4
Source SRR2089713
Length 24
Mature sequence(if miRNA) 1 - UGGUGACUAGAGAAAUGAAGGGGA - 24
Stem-loop(if miRNA) --                 A       UC   A    U  UUCCUCUC
  UGGUGACUAGAGAAAUG AGGGGAU  AUG GGGA GA        U
  ||||||||||||||||| |||||||  ||| |||| ||
  ACCACUGGUCUUUUUAU UCUCCUA  UAU CCCU CU        A
AA                 C       GA   C    C  UAUAACUU
Stem-loop sequence UGGUGACUAGAGAAAUGAAGGGGAUUCAUGAGGGAUGAUUCCUCUCUAUUCAAUAUUCCUCCCCUAUAGAUCCUCUCUAUUUUUCUGGUCACCAAA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
EU974067.1
ncRNA:24   AGGGGAAGUAAAGAGAUCAGUGGU   1
  ||=|||*||**|||||||||||||
targets:820   UCUCCUCCAAAUCUCUAGUCACCA   843

3.0 Zea mays clone 438891 mRNA sequence NA coding protein psRNATarget