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BaseInfo

ncRNA ID novel_zma_miR2597
Species Zea mays
Class miRNA
Genome position Chr4:209827329-209827373 [+]
Reference genome RefGen_v4
Source SRR2089713;SRR2089705
Length 21
Mature sequence(if miRNA) 1 - CGGAUAAGCAUGUUACGGGCC - 21
Stem-loop(if miRNA) --    U   CA         C
  CGGA AAG  UGUUACGGG C
  |||| |||  ||||||||| U
  GUCU UUC  AUAAUGUCU C
AU    U   CG         A
Stem-loop sequence CGGAUAAGCAUGUUACGGGCCUCAUCUGUAAUAGCCUUUUCUGUA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
BT061617.1
ncRNA:21   CCGGGCAUUGUACGAAUAGGC   1
  *|=||||||*|||||||||||
targets:1434   AGUCCGUAAGAUGCUUAUCCG   1454

2.5 Zea mays full-length cDNA clone ZM_BFb0166C13 mRNA, complete cds NA coding protein psRNATarget
NM_001174384.1
ncRNA:21   CCGGGCAUUGUACGAAUAGGC   1
  *|=||||||*|||||||||||
targets:1434   AGUCCGUAAGAUGCUUAUCCG   1454

2.5 Zea mays putative calcium-dependent protein kinase family protein (LOC100381559), mRNA NA coding protein psRNATarget