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BaseInfo

ncRNA ID	novel_zma_miR2594
Species	Zea mays
Class	miRNA
Genome position	Chr4:19218281-19218343 [+]
Reference genome	RefGen_v4
Source	SRR2089713
Length	23
Mature sequence(if miRNA)	1 - GGAAGGAUUGGAGGGGAUUGAGG - 23
Stem-loop(if miRNA)	---G  A                   -    C     GA GGAUUGGAGGGGAUUGAGG GGAA U     || ||||||||||||||||||| |||| C     CU CCUAAUCUCCCCUAACUCC CCUU A AGUG  C                   U    U
Stem-loop sequence	GGAAGGAUUGGAGGGGAUUGAGGGGAACUCAUUUCCUCCUCAAUCCCCUCUAAUCCCUCGUGA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
LQ235485.1	ncRNA:23   GGAGUUAGGGGAGGUUAGGAAGG   1   ||||||||||||||||||||||| targets:34   CCUCAAUCCCCUCCAAUCCUUCC   56 Target Full Sequence	0.0	Sequence 1480 from Patent EP2985353	NA	coding protein	psRNATarget
JB163816.1	ncRNA:23   GGAGUUAGGGGAGGUUAGGAAGG   1   ||||||||||||||||||||||| targets:34   CCUCAAUCCCCUCCAAUCCUUCC   56 Target Full Sequence	0.0	Sequence 1480 from Patent EP2559767	NA	coding protein	psRNATarget
HI403355.1	ncRNA:23   GGAGUUAGGGGAGGUUAGGAAGG   1   ||||||||||||||||||||||| targets:34   CCUCAAUCCCCUCCAAUCCUUCC   56 Target Full Sequence	0.0	Sequence 1480 from Patent EP2074227	NA	coding protein	psRNATarget
JB163954.1	ncRNA:23   GGAGUUAGGGGAGGUUAGGAAGG   1   ||||||||||||||||||||*|| targets:36   CCUCAAUCCCCUCCAAUCCUCCC   58 Target Full Sequence	1.5	Sequence 1618 from Patent EP2559767	NA	coding protein	psRNATarget
LQ235623.1	ncRNA:23   GGAGUUAGGGGAGGUUAGGAAGG   1   ||||||||||||||||||||*|| targets:36   CCUCAAUCCCCUCCAAUCCUCCC   58 Target Full Sequence	1.5	Sequence 1618 from Patent EP2985353	NA	coding protein	psRNATarget
HI403493.1	ncRNA:23   GGAGUUAGGGGAGGUUAGGAAGG   1   ||||||||||||||||||||*|| targets:36   CCUCAAUCCCCUCCAAUCCUCCC   58 Target Full Sequence	1.5	Sequence 1618 from Patent EP2074227	NA	coding protein	psRNATarget
BT088155.1	ncRNA:23   GGAGUUAGGGGAGGUUAGGAAGG   1   =|||||||||||||||||||*|| targets:1467   UCUCAAUCCCCUCCAAUCCUCCC   1489 Target Full Sequence	1.5	Zea mays full-length cDNA clone ZM_BFc0038D09 mRNA, complete cds	NA	coding protein	psRNATarget
XM_020546009.1	ncRNA:23   GGAGUUAGGGGAGGUUAGGAAGG   1   |||=**||=|||||||||||||| targets:42   CCUUCCUCUCCUCCAAUCCUUCC   64 Target Full Sequence	3.0	PREDICTED: Zea mays homeobox-leucine zipper protein ROC7 (LOC103641332), transcript variant X2, mRNA	NA	coding protein	psRNATarget