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BaseInfo

ncRNA ID novel_zma_miR2592
Species Zea mays
Class miRNA
Genome position Chr4:162352633-162352710 [+]
Reference genome RefGen_v4
Source SRR2089713
Length 24
Mature sequence(if miRNA) 55 - GUGGACAUUGCGCAUAGAGUCAGA - 78
Stem-loop(if miRNA) --     A  -      CG   G  UCCA -- AAAAACCUGU
  UGGCU UA GCGCAA  GUC AC    A  C          A
  ||||| || ||||||  ||| ||    |  |
  ACUGA AU CGCGUU  CAG UG    C  G          A
AG     G  A      -A   G  ---- GU ACAUCGUGAA
Stem-loop sequence UGGCUAUAGCGCAACGGUCGACUCCAACAAAAACCUGUAAAAGUGCUACAGUGCGUGGACAUUGCGCAUAGAGUCAGA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
EZ088671.1
ncRNA:24   AGACUGAGAUACGCGUUACAGGUG   1
  ||||-||*||||||||||*|||||
targets:465   UCUG-CUAUAUGCGCAAUCUCCAC   487

2.5 TSA: Zea mays contig24317, mRNA sequence NA coding protein psRNATarget