ncRNA ID | novel_zma_miR2589 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr4:153577444-153577649 [+] |
Reference genome | RefGen_v4 |
Source | SRR2089713;SRR5451004 |
Length | 24 |
Mature sequence(if miRNA) | 183 - UUCUCUGUAGAUAUUAUGAGGCAU - 206 |
Stem-loop(if miRNA) |
--  UC             -U  C    AAAG      UAGGAAA    AGAAA   AAAU  C      G      G   C    G      CA         GAG       GU  UGUAAUGUCUACA  GA GGGU    CGCUCU       GGUG     AGC    AC GAACUU UCAAGU AUU AGGU CAUCUA  GGGUUGUCU   GUCCG   ||  |||||||||||||  || ||||    ||||||       ||||     |||    || |||||| |||||| ||| |||| ||||||  |||||||||   ||||U   CG  GUAUUAUAGAUGU  CU CCCG    GCGAGG       CUAU     UCG    UG CUUGGA GGUUCA UAA UCCG GUGGAU  UUCAACAGG   CAGGU UA  GA             CU  U    --AA      -------    ---GG   ACAC  C      G      G   -    G      --         -AA     |
Stem-loop sequence | GUUCUGUAAUGUCUACAUGACGGGUAAAGCGCUCUUAGGAAAGGUGAGAAAAGCAAAUACCGAACUUGUCAAGUGAUUCAGGUGCAUCUACAGGGUUGUCUGAGGUCCGUUGGACAAGGACAACUUUAGGUGGGCCUAAUGACUUGGGAGGUUCCGUCACAGCUGGUAUCGGAGCGAAGCCCUUCUCUGUAGAUAUUAUGAGGCAU |