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BaseInfo

ncRNA ID	novel_zma_miR2588
Species	Zea mays
Class	miRNA
Genome position	Chr4:147828607-147828661 [+]
Reference genome	RefGen_v4
Source	SRR2089713;SRR2089714
Length	21
Mature sequence(if miRNA)	1 - UGGGGUUUGGGCAGAUUUGGA - 21
Stem-loop(if miRNA)	--U     -UUG     ---   UG  - A    GGGGU    GGCAG   AUU  GA C G    |||||    |||||   |||  || |    CUCCA    UCGUC   UGA  UU G A CUG     UCUA     AGG   GU  U U
Stem-loop sequence	UGGGGUUUGGGCAGAUUUGGACAGAUGUUUUGAGUGGACUGCUAUCUACCUCGUC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
BT065586.1	ncRNA:21   AGGUUUAGACGGGUUUGGGGU   1   *||||*|=||||||||||||* targets:236   GCCAACUUUGCCCAAACCCCU   256 Target Full Sequence	3.0	Zea mays full-length cDNA clone ZM_BFb0315O03 mRNA, complete cds	NA	coding protein	psRNATarget
EU975832.1	ncRNA:21   AGGUUUAGACGGGUUUGGGGU   1   *||||*|=||||||||||||* targets:246   GCCAACUUUGCCCAAACCCCU   266 Target Full Sequence	3.0	Zea mays clone 502363 CAAX prenyl protease 1 mRNA, complete cds	NA	coding protein	psRNATarget
NM_001159032.1	ncRNA:21   AGGUUUAGACGGGUUUGGGGU   1   *||||*|=||||||||||||* targets:246   GCCAACUUUGCCCAAACCCCU   266 Target Full Sequence	3.0	Zea mays CAAX prenyl protease 1 (LOC100286144), mRNA	NA	coding protein	psRNATarget
XM_008645651.1	ncRNA:21   AGGUUUAGACGGGUUUGGGGU   1   *||||*|=||||||||||||* targets:271   GCCAACUUUGCCCAAACCCCU   291 Target Full Sequence	3.0	PREDICTED: Zea mays CAAX prenyl protease 1 (LOC100286144), transcript variant X1, mRNA	NA	coding protein	psRNATarget
BT069987.1	ncRNA:21   AGGUUUAGACGGGUUUGGGGU   1   *|||||*|*|||||||||||| targets:66   GCCAAACCAGCCCAAACCCCA   86 Target Full Sequence	2.5	Zea mays full-length cDNA clone ZM_BFb0353A06 mRNA, complete cds	NA	coding protein	psRNATarget
EU967667.1	ncRNA:21   AGGUUUAGACGGGUUUGGGGU   1   *|||||*|*|||||||||||| targets:57   GCCAAACCAGCCCAAACCCCA   77 Target Full Sequence	2.5	Zea mays clone 305200 mRNA sequence	NA	coding protein	psRNATarget
XM_008654829.1	ncRNA:21   AGGUUUAGACGGGUUUGGGGU   1   *|||||*|*|||||||||||| targets:170   GCCAAACCAGCCCAAACCCCA   190 Target Full Sequence	2.5	PREDICTED: Zea mays LysM domain-containing GPI-anchored protein 2 (LOC100280377), mRNA	NA	coding protein	psRNATarget