ncRNA ID | novel_zma_miR2586 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr4:128928908-128929031 [+] |
Reference genome | RefGen_v4 |
Source | SRR2089713 |
Length | 22 |
Mature sequence(if miRNA) | 1 - UGAUUGUGUAAUGUGUUGGCUA - 22 |
Stem-loop(if miRNA) |
--UGA       A     U    AUUCACUU     -        U    -----A   GACAUAUCAAG      UUGUGUA UGUGU GGCU        UCUCC AAAUAUGU GCAU      AUU           U      ||||||| ||||| ||||        ||||| |||||||| ||||      |||           U      AACACAU ACACA CCGG        GGGGG UUUAUACA CGUA      ACU           A UUAUG       -     -    --------     A        -    CUCAAA   CUAGAAGUAUA |
Stem-loop sequence | UGAUUGUGUAAUGUGUUGGCUAUUCACUUUCUCCAAAUAUGUUGCAUAAUUGACAUAUCAAGUUAAUAUGAAGAUCUCAAAACUCAUGCACAUAUUUAGGGGGGGCCACACAUACACAAGUAUU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
EZ068170.1 |
|
3.0 | TSA: Zea mays contig03805, mRNA sequence | NA | coding protein | psRNATarget |