| ncRNA ID | osa-miR812i |
| Species | Oryza sativa |
| Class | miRNA |
| Genome position | Chr7:22152329-22152570 [+] |
| Reference genome | MSU7 |
| Source | miRBase |
| Length | 24 |
| Mature sequence(if miRNA) | 173 - AAGACGGAUGAUUAAAGUUGGACA - 196 |
| Stem-loop(if miRNA) |
--UA A CA A AUA C A AAACUU UG UUAGUAUUUUUUUAUUAGAUUGUAAAACAUGAAU G ACUCCCUC UCC AAAAUAAGCGUAGCC AGUUUUCGU UUCAACUU GAUCAUCUGUCUUAUUUG UUUUA A A | |||||||| ||| ||||||||||||||| ||||||||| |||||||| |||||||||||||||||| ||||| | C UGAGGGAG AGG UUUUAUUCGCGUCGG UCAAAAGCA AGGUUGAA UUAGUAGGCAGAAUAAAU AAAAU C U GAGG A UA G GAC C A --AAAA -- UUUUAGAUUUUAUUAUAUUCAGUACGUAUUUCAU |
| Stem-loop sequence | UAGAACUCCCUCCAUCCAAAAAUAAGCGUAGCCAUAAGUUUUCGUCUUCAACUUAGAUCAUCUGUCUUAUUUGAAACUUUUUUAUGAUUAGUAUUUUUUUAUUAGAUUGUAAAACAUGAAUAUUACUUUAUGCAUGACUUAUAUUAUUUUAGAUUUUCUAAAAAAAAUAAAUAAGACGGAUGAUUAAAGUUGGACACGAAAACUCAGGGCUGCGCUUAUUUUGGGAAUGAGGGAGUACGGAG |
| Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AK070816.1 |
|
1.5 | Oryza sativa Japonica Group cDNA clone:J023066M01, full insert sequence | NA | coding protein | psRNATarget | |||||||||
| AK110633.1 |
|
1.5 | Oryza sativa Japonica Group cDNA clone:002-169-C01, full insert sequence | NA | coding protein | psRNATarget | |||||||||
| AK064607.1 |
|
1.5 | Oryza sativa Japonica Group cDNA clone:002-113-A06, full insert sequence | NA | coding protein | psRNATarget | |||||||||
| XM_015795853.1 |
|
1.5 | PREDICTED: Oryza sativa Japonica Group uncharacterized LOC107282086 (LOC107282086), transcript variant X3, mRNA | uncharacterized LOC107282086(LOC107282086) | coding protein | psRNATarget |
| 1 | PMID:18687877
"A diverse set of microRNAs and microRNA-like small RNAs in developing rice grains"; Zhu QH, Spriggs A, Matthew L, Fan L, Kennedy G, Gubler F, Helliwell C; Genome Res. 18:1456-1465(2008). |