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BaseInfo

ncRNA ID	novel_zma_miR2579
Species	Zea mays
Class	miRNA
Genome position	Chr5:202545991-202546042 [+]
Reference genome	RefGen_v4
Source	SRR1583944
Length	24
Mature sequence(if miRNA)	29 - AGGUCUGCGCUCUUUGUCGAGUGU - 52
Stem-loop(if miRNA)	--            A C  AG  GGU   ACUCGGCAAAGA C UA  CC   G   |||||||||||| | ||  ||   UGAGCUGUUUCU G GU  GG   C UG            C C  CU  ACC
Stem-loop sequence	ACUCGGCAAAGAACCUAAGCCGGUGCCCAGGUCUGCGCUCUUUGUCGAGUGU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_008660662.2	ncRNA:24   UGUG-AGCUGUUUCUCGCGUCUGGA   1   ||=|-||*||||||||||||*|||| targets:248   ACGCAUCAACAAAGAGCGCAUACCU   272 Target Full Sequence	2.5	PREDICTED: Zea mays uncharacterized LOC100383561 (LOC100383561), transcript variant X1, mRNA	NA	coding protein	psRNATarget
BT085762.2	ncRNA:24   UGUG-AGCUGUUUCUCGCGUCUGGA   1   ||=|-||*||||||||||||*|||| targets:675   ACGCAUCAACAAAGAGCGCAUACCU   699 Target Full Sequence	2.5	Zea mays full-length cDNA clone ZM_BFc0058N23 mRNA, complete cds	NA	coding protein	psRNATarget
BT067600.2	ncRNA:24   UGUG-AGCUGUUUCUCGCGUCUGGA   1   ||=|-||*||||||||||||*|||| targets:2013   ACGCAUCAACAAAGAGCGCAUACCU   2037 Target Full Sequence	2.5	Zea mays full-length cDNA clone ZM_BFc0097B04 mRNA, complete cds	NA	coding protein	psRNATarget
NM_001176209.1	ncRNA:24   UGUG-AGCUGUUUCUCGCGUCUGGA   1   ||=|-||*||||||||||||*|||| targets:2013   ACGCAUCAACAAAGAGCGCAUACCU   2037 Target Full Sequence	2.5	Zea mays uncharacterized LOC100383561 (LOC100383561), mRNA	NA	coding protein	psRNATarget