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BaseInfo

ncRNA ID	novel_zma_miR2570
Species	Zea mays
Class	miRNA
Genome position	Chr3:159082454-159082544 [-]
Reference genome	RefGen_v4
Source	SRR2089713
Length	21
Mature sequence(if miRNA)	71 - UGACAAGGGAAUUGGAGGGGA - 91
Stem-loop(if miRNA)	--                       - --AU    AGGAAAUCCCUU   UGACAAGGGAAUUGGAGGGGAUC C    GGGG            C   ||||||||||||||||||||||| |    ||||   ACUGUUCCCUUAACCUCCCCUAG G    AUAA            G CC                       A AACG    AUUAAAACUUAU
Stem-loop sequence	UGACAAGGGAAUUGGAGGGGAUCCAUGGGGAGGAAAUCCCUUCGUAUUCAAAAUUAAAUAGCAAGAGAUCCCCUCCAAUUCCCUUGUCACC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
BT069264.1	ncRNA:21   AGGGGAGGUUAAGGGAACAGU   1   ||||||||||||=|||||||| targets:611   UCCCCUCCAAUUUCCUUGUCA   631 Target Full Sequence	1.5	Zea mays full-length cDNA clone ZM_BFc0018B12 mRNA, complete cds	NA	coding protein	psRNATarget
XM_020551510.1	ncRNA:21   AGGGGAGGUUAAGGGAACAGU   1   |||||*=|||||||||||||| targets:1578   UCCCCCUCAAUUCCCUUGUCA   1598 Target Full Sequence	2.0	PREDICTED: Zea mays putative ACT-domain containing protein kinase family protein (LOC100280199), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_020547639.1	ncRNA:21   AGGGGAGGUUAAGGGAACAGU   1   |||||**|||||||||||||| targets:1556   UCCCCCACAAUUCCCUUGUCA   1576 Target Full Sequence	2.0	PREDICTED: Zea mays uncharacterized LOC100278581 (LOC100278581), transcript variant X4, mRNA	NA	coding protein	psRNATarget
XM_020547637.1	ncRNA:21   AGGGGAGGUUAAGGGAACAGU   1   |||||**|||||||||||||| targets:1556   UCCCCCACAAUUCCCUUGUCA   1576 Target Full Sequence	2.0	PREDICTED: Zea mays uncharacterized LOC100278581 (LOC100278581), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_020547640.1	ncRNA:21   AGGGGAGGUUAAGGGAACAGU   1   |||||**|||||||||||||| targets:1556   UCCCCCACAAUUCCCUUGUCA   1576 Target Full Sequence	2.0	PREDICTED: Zea mays uncharacterized LOC100278581 (LOC100278581), transcript variant X5, mRNA	NA	coding protein	psRNATarget
XM_020547638.1	ncRNA:21   AGGGGAGGUUAAGGGAACAGU   1   |||||**|||||||||||||| targets:1556   UCCCCCACAAUUCCCUUGUCA   1576 Target Full Sequence	2.0	PREDICTED: Zea mays uncharacterized LOC100278581 (LOC100278581), transcript variant X3, mRNA	NA	coding protein	psRNATarget
XM_020547636.1	ncRNA:21   AGGGGAGGUUAAGGGAACAGU   1   |||||**|||||||||||||| targets:1556   UCCCCCACAAUUCCCUUGUCA   1576 Target Full Sequence	2.0	PREDICTED: Zea mays uncharacterized LOC100278581 (LOC100278581), transcript variant X1, mRNA	NA	coding protein	psRNATarget