ncRNA ID | novel_zma_miR2562 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr5:159468731-159468948 [+] |
Reference genome | RefGen_v4 |
Source | SRR1583944 |
Length | 24 |
Mature sequence(if miRNA) | 1 - UCCCUCUGUUCAUAAAUAUAUGAC - 24 |
Stem-loop(if miRNA) |
--UC   C                        -     AAAAA        A         A     C    AA   -----       -U   UU   U  --CC     UU     CCU UGUUCAUAAAUAUAUGACACCGUU AUUUU     AAAACUUU ACCACUCGU UUAUU AAAA  UAA     UGAGUUA  CAU  AUU UC    GUGAU  G     ||| |||||||||||||||||||||||| |||||     |||||||| ||||||||| ||||| ||||  |||     |||||||  |||  ||| ||    |||||  U     GGA GCAAGUGUUUAUAUACUGUGGCAA UGAAA     UUUUGAAA UGGUGAGCA AAUAA UUUU  AUU     AUUCAAU  GUG  UGA AG    CACUA  U UGAU   A                        C     AAAGC        C         G     A    AC   UUAAA       UC   UU   U  AAUU     UU |
Stem-loop sequence | UCCCUCUGUUCAUAAAUAUAUGACACCGUUAUUUUAAAAAAAAACUUUAACCACUCGUAUUAUUCAAAAAAUAAUGAGUUAUCAUUUAUUUUCCCGUGAUUUGUUUUAUCACUUAAGAUAGUUUGUGCUUAACUUAAAAUUUUACAUUUUAAAUAAGACGAGUGGUCAAAGUUUUCGAAAAAAGUCAACGGUGUCAUAUAUUUGUGAACGAAGGUAGU |