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BaseInfo

ncRNA ID novel_zma_miR2562
Species Zea mays
Class miRNA
Genome position Chr5:159468731-159468948 [+]
Reference genome RefGen_v4
Source SRR1583944
Length 24
Mature sequence(if miRNA) 1 - UCCCUCUGUUCAUAAAUAUAUGAC - 24
Stem-loop(if miRNA) --UC   C                        -     AAAAA        A         A     C    AA   -----       -U   UU   U  --CC     UU
    CCU UGUUCAUAAAUAUAUGACACCGUU AUUUU     AAAACUUU ACCACUCGU UUAUU AAAA  UAA     UGAGUUA  CAU  AUU UC    GUGAU  G
    ||| |||||||||||||||||||||||| |||||     |||||||| ||||||||| ||||| ||||  |||     |||||||  |||  ||| ||    |||||  U
    GGA GCAAGUGUUUAUAUACUGUGGCAA UGAAA     UUUUGAAA UGGUGAGCA AAUAA UUUU  AUU     AUUCAAU  GUG  UGA AG    CACUA  U
UGAU   A                        C     AAAGC        C         G     A    AC   UUAAA       UC   UU   U  AAUU     UU
Stem-loop sequence UCCCUCUGUUCAUAAAUAUAUGACACCGUUAUUUUAAAAAAAAACUUUAACCACUCGUAUUAUUCAAAAAAUAAUGAGUUAUCAUUUAUUUUCCCGUGAUUUGUUUUAUCACUUAAGAUAGUUUGUGCUUAACUUAAAAUUUUACAUUUUAAAUAAGACGAGUGGUCAAAGUUUUCGAAAAAAGUCAACGGUGUCAUAUAUUUGUGAACGAAGGUAGU