ncRNA ID | novel_zma_miR2560 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr3:194776872-194777042 [+] |
Reference genome | RefGen_v4 |
Source | SRR2089713 |
Length | 25 |
Mature sequence(if miRNA) | 147 - GGAAAUAGGUUUCCACUGGCGGGUU - 171 |
Stem-loop(if miRNA) |
--A      A  A    UG                     -UAAA                 AGA                  AGU    CCGCCA UG AAAU  AUUUCCACUGGCGGUUGUCUU     AACCGCCAGUGGAAAUA   UGUUUCCACUGGCGGUUA   U    |||||| || ||||  |||||||||||||||||||||     |||||||||||||||||   ||||||||||||||||||    GGCGGU AC UUUG  UAAAGGUGACCGCCAAUAGAA     UUGGCGGUCACCUUUGU   AUAAAGGUGACCGCCAAU   A UUG      C  C    GA                     UUGUG                 AGG                  AGA |
Stem-loop sequence | ACCGCCAAUGAAAAUUGAUUUCCACUGGCGGUUGUCUUUAAAAACCGCCAGUGGAAAUAAGAUGUUUCCACUGGCGGUUAAGUUAAGAUAACCGCCAGUGGAAAUAGGAUGUUUCCACUGGCGGUUGUGUUAAGAUAACCGCCAGUGGAAAUAGGUUUCCACUGGCGGGUU |