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BaseInfo

ncRNA ID novel_zma_miR2560
Species Zea mays
Class miRNA
Genome position Chr3:194776872-194777042 [+]
Reference genome RefGen_v4
Source SRR2089713
Length 25
Mature sequence(if miRNA) 147 - GGAAAUAGGUUUCCACUGGCGGGUU - 171
Stem-loop(if miRNA) --A      A  A    UG                     -UAAA                 AGA                  AGU
   CCGCCA UG AAAU  AUUUCCACUGGCGGUUGUCUU     AACCGCCAGUGGAAAUA   UGUUUCCACUGGCGGUUA   U
   |||||| || ||||  |||||||||||||||||||||     |||||||||||||||||   ||||||||||||||||||
   GGCGGU AC UUUG  UAAAGGUGACCGCCAAUAGAA     UUGGCGGUCACCUUUGU   AUAAAGGUGACCGCCAAU   A
UUG      C  C    GA                     UUGUG                 AGG                  AGA
Stem-loop sequence ACCGCCAAUGAAAAUUGAUUUCCACUGGCGGUUGUCUUUAAAAACCGCCAGUGGAAAUAAGAUGUUUCCACUGGCGGUUAAGUUAAGAUAACCGCCAGUGGAAAUAGGAUGUUUCCACUGGCGGUUGUGUUAAGAUAACCGCCAGUGGAAAUAGGUUUCCACUGGCGGGUU