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BaseInfo

ncRNA ID novel_zma_miR2559
Species Zea mays
Class miRNA
Genome position Chr5:159143475-159143683 [+]
Reference genome RefGen_v4
Source SRR1583944
Length 24
Mature sequence(if miRNA) 186 - ACUCUAUAUAUGAUAUCAUGACAC - 209
Stem-loop(if miRNA) --C                       A                                                                -   UG    -  U
   UCAUGAUAUCAUAUAUAGAGUCU UGAUAAAAAUUUGAGAAAGUUUCGAGAAAGCUGUGACACACUAUGUGUAGAAACCUAAGAGAUC AUG  UGGA UC C
   ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||  |||| || U
   AGUACUAUAGUAUAUAUCUCAGA ACUAUUUUUAAACUCUUUUAAAGUUCUUUCGACACUGUGUGAUACACAUCUUUGGAUUCUCUAG UGU  ACUU AG A
CAC                       C                                                                G   GU    U  U
Stem-loop sequence CUCAUGAUAUCAUAUAUAGAGUCUAUGAUAAAAAUUUGAGAAAGUUUCGAGAAAGCUGUGACACACUAUGUGUAGAAACCUAAGAGAUCAUGUGUGGAUCUCUAUGAUUUCAUGUGUGGAUCUCUUAGGUUUCUACACAUAGUGUGUCACAGCUUUCUUGAAAUUUUCUCAAAUUUUUAUCACAGACUCUAUAUAUGAUAUCAUGACAC