ncRNA ID | novel_zma_miR2559 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr5:159143475-159143683 [+] |
Reference genome | RefGen_v4 |
Source | SRR1583944 |
Length | 24 |
Mature sequence(if miRNA) | 186 - ACUCUAUAUAUGAUAUCAUGACAC - 209 |
Stem-loop(if miRNA) |
--C                       A                                                                -   UG    -  U    UCAUGAUAUCAUAUAUAGAGUCU UGAUAAAAAUUUGAGAAAGUUUCGAGAAAGCUGUGACACACUAUGUGUAGAAACCUAAGAGAUC AUG  UGGA UC C    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||  |||| || U    AGUACUAUAGUAUAUAUCUCAGA ACUAUUUUUAAACUCUUUUAAAGUUCUUUCGACACUGUGUGAUACACAUCUUUGGAUUCUCUAG UGU  ACUU AG A CAC                       C                                                                G   GU    U  U |
Stem-loop sequence | CUCAUGAUAUCAUAUAUAGAGUCUAUGAUAAAAAUUUGAGAAAGUUUCGAGAAAGCUGUGACACACUAUGUGUAGAAACCUAAGAGAUCAUGUGUGGAUCUCUAUGAUUUCAUGUGUGGAUCUCUUAGGUUUCUACACAUAGUGUGUCACAGCUUUCUUGAAAUUUUCUCAAAUUUUUAUCACAGACUCUAUAUAUGAUAUCAUGACAC |