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BaseInfo

ncRNA ID novel_zma_miR2558
Species Zea mays
Class miRNA
Genome position Chr3:133366965-133367168 [+]
Reference genome RefGen_v4
Source SRR2089713;SRR5451004
Length 24
Mature sequence(if miRNA) 181 - UUCUCUGUAGAUAUUAUGAGGCAU - 204
Stem-loop(if miRNA) --  UC             -   C    GAAA    --   GGAAAGGUAAGAAAGAAGAUACCGAACUUGUCGAGUGAUUCAGGAACAUCUACAGGGUUGUCU
  GU  UGUAAUGUCUGCA AGA GGGU    UGUU  CCU                                                               G
  ||  ||||||||||||| ||| ||||    ||||  |||                                                               A
  CG  GUAUUAUAGAUGU UCU CCCG    GCGA  CUA                                                               U
UA  GA             C   U    --AA    GG   UGGUCGACACUGCCUUGGAGGGUUCAUUAAUCCGGGUGGAUGUCAACAGGAACAGGUUGUCUG
Stem-loop sequence GUUCUGUAAUGUCUGCAAGACGGGUGAAAUGUUCCUGGAAAGGUAAGAAAGAAGAUACCGAACUUGUCGAGUGAUUCAGGAACAUCUACAGGGUUGUCUGAUGUCUGUUGGACAAGGACAACUGUAGGUGGGCCUAAUUACUUGGGAGGUUCCGUCACAGCUGGUAUCGGAGCGAAGCCCUUCUCUGUAGAUAUUAUGAGGCAU