ncRNA ID | novel_zma_miR2557 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr2:8519210-8519271 [+] |
Reference genome | RefGen_v4 |
Source | SRR2089713 |
Length | 24 |
Mature sequence(if miRNA) | 1 - GGUGUACGCGGCUCGCUCUGCCAA - 24 |
Stem-loop(if miRNA) |
--       -    C  G    G      UC  U   GGUGUAC GCGG UC CUCU CCAAGG  GA U   ||||||| |||| || |||| ||||||  ||   UUACAUG CGUC AG GAGG GGUUCC  CU U AU       G    -  -    -      --  G |
Stem-loop sequence | GGUGUACGCGGCUCGCUCUGCCAAGGUCGAUUUGUCCCUUGGGGAGGACUGCGGUACAUUUA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
EZ073878.1 |
|
1.5 | TSA: Zea mays contig09515, mRNA sequence | NA | coding protein | psRNATarget | |||||||||
EU940916.1 |
|
1.5 | Zea mays clone 1212834 mRNA sequence | NA | coding protein | psRNATarget | |||||||||
EU940954.1 |
|
1.5 | Zea mays clone 1220838 mRNA sequence | NA | coding protein | psRNATarget |