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BaseInfo

ncRNA ID novel_zma_miR2550
Species Zea mays
Class miRNA
Genome position Chr5:13257235-13257422 [-]
Reference genome RefGen_v4
Source SRR1583941
Length 22
Mature sequence(if miRNA) 1 - AAAUGAUGUGGCAUAUUGACGU - 22
Stem-loop(if miRNA) --A   U                              A                   -----------CA  -  CAUCUUCAUCGACUAGCCCAAUGUG
   UCA UAUGCCACAUCGUUUCUCAAAAUAAAAUAA GACCAUGGAAAAUUUAGCC             AU GA                         C
   ||| |||||||||||||||||||||||||||||| |||||||||||||||||||             || ||
   AGU AUACGGUGUAGUAAAGAGUUUUAUUUUGUU CUGGUACCUUUUAAAUCGG             CU GU                         C
UGC   U                              A                   UUUAACUCACUCU  U  CAGGUUUGUAUCCAAUUCCAACAUU
Stem-loop sequence AUCAUUAUGCCACAUCGUUUCUCAAAAUAAAAUAAAGACCAUGGAAAAUUUAGCCCAAUGACAUCUUCAUCGACUAGCCCAAUGUGCCUUACAACCUUAACCUAUGUUUGGACUGUUCUCUCACUCAAUUUGGCUAAAUUUUCCAUGGUCAUUGUUUUAUUUUGAGAAAUGAUGUGGCAUAUUGACGU