ncRNA ID | novel_zma_miR2549 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr10:130948440-130948645 [+] |
Reference genome | RefGen_v4 |
Source | SRR2089713;SRR5451004 |
Length | 24 |
Mature sequence(if miRNA) | 183 - UUCUCUGUAGAUAUUAUGAGGCAU - 206 |
Stem-loop(if miRNA) |
--  UC             -   C    GAAA      UGGGAAA     GAAA   AGAU  C      G          C   GG         GGU     GAA       GU  UGUAAUGUCUGCA AGA GGGU    CGCUCU       GGUGA    AGC    AC GAACUU UCAAGUGAUU AGG  CACCUACAG   UGUCU   GUCCG   ||  ||||||||||||| ||| ||||    ||||||       |||||    |||    || |||||| |||||||||| |||  |||||||||   |||||   ||||U   CG  GUAUUAUAGAUGU UCU CCCG    GCGAGG       CUAUU    UCG    UG CUUGGA GGUUCAUUAA UCC  GUGGAUGUC   ACAGG   CAGGU UA  GA             C   U    --AA      -------     ---G   ACAC  C      G          -   GG         --A     -AA     |
Stem-loop sequence | GUUCUGUAAUGUCUGCAAGACGGGUGAAACGCUCUUGGGAAAGGUGAGAAAAGCAGAUACCGAACUUGUCAAGUGAUUCAGGGGCACCUACAGGGUUGUCUGAAGUCCGUUGGACAAGGACAACUGUAGGUGGGCCUAAUUACUUGGGAGGUUCCGUCACAGCUGUUAUCGGAGCGAAGCCCUUCUCUGUAGAUAUUAUGAGGCAU |